| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g16031 | 12:4,495,209-4,495,847 | - | C1H12g00057 | CX12g018011 | - | - | - | Detail |
| C2H12g13338 | 12:4,504,009-4,509,180 | - | C1H12g21936 | CX12g015241 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g07984 | 12:4,516,918-4,520,606 | + | C1H12g18620 | CX12g018163 | LOC_Os12g09710 | Os12g0198900 | - | Detail |
| C2H12g13398 | 12:4,522,686-4,525,643 | - | C1H12g20422 | CX12g016268 | LOC_Os12g09700 | Os12g0198700 | - | Detail |
| C2H12g09085 | 12:4,531,956-4,542,029 | - | C1H12g03660 | CX12g016763 | LOC_Os12g10460 | Os12g0199100 | - | Detail |
| C2H12g25382 | 12:4,561,839-4,565,485 | + | C1H12g18718 | - | - | - | - | Detail |
| C2H12g21993 | 12:4,568,789-4,571,070 | + | C1H12g29942 | CX12g015724 | LOC_Os12g10170 | Os12g0199500 | - | Detail |
| C2H12g02513 | 12:4,596,026-4,598,793 | - | C1H12g23734 | CX12g017268 | LOC_Os11g14670 | - | - | Detail |
| C2H12g06069 | 12:4,610,752-4,611,165 | - | C1H12g26851 | - | - | - | - | Detail |
| C2H12g23156 | 12:4,724,987-4,726,528 | + | C1H12g08099 | CX12g015438 | LOC_Os12g10140 | Os12g0202700 | - | Detail |
| C2H12g10521 | 12:4,727,388-4,728,439 | + | C1H12g25986 | CX12g015438 | LOC_Os12g10170 | Os12g0240900 | NOMT, OsNOMT, COMTL3, OsCOMTL3 | Detail |
| C2H12g28534 | 12:4,729,007-4,735,179 | - | C1H12g24838 | CX12g018391 | LOC_Os12g10180 | Os12g0202900 | - | Detail |
| C2H12g14596 | 12:4,736,631-4,738,688 | + | C1H12g13815 | CX12g015359 | LOC_Os12g10184 | Os12g0202850 | PGL12 | Detail |
| C2H12g19800 | 12:4,739,696-4,743,084 | + | C1H12g15070 | CX12g015359 | LOC_Os12g10190 | Os12g0203000 | - | Detail |
| C2H12g26432 | 12:4,744,095-4,746,553 | - | C1H12g07643 | CX12g015476 | LOC_Os12g10200 | Os12g0203100 | - | Detail |
| C2H12g29948 | 12:4,750,872-4,752,957 | + | C1H12g30565 | CX12g018695 | LOC_Os12g10220 | Os12g0203200 | - | Detail |
| C2H12g27282 | 12:4,780,000-4,780,482 | + | C1H12g14694 | CX12g017473 | LOC_Os12g10260 | Os12g0204000 | - | Detail |
| C2H12g03169 | 12:4,781,447-4,786,377 | + | C1H12g14346 | CX12g017473 | LOC_Os12g10270 | Os12g0632401 | - | Detail |
| C2H12g06639 | 12:4,791,041-4,794,004 | + | C1H12g25521 | CX12g015937 | LOC_Os12g10280 | Os12g0204100 | - | Detail |
| C2H12g05093 | 12:4,816,407-4,818,311 | - | C1H12g12793 | CX12g017749 | LOC_Os12g10330 | Os12g0204600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040404 | 5:1,530,862-1,537,369 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| CX5g040242 | 5:1,549,571-1,553,745 | - | C1H5g13927 | C2H5g17204 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| CX5g038388 | 5:1,554,499-1,554,978 | + | C1H5g19982 | C2H5g23034 | - | - | - | Detail |
| CX5g039763 | 5:1,561,986-1,563,560 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g04060 | Os05g0131000 | - | Detail |
| CX5g041042 | 5:1,576,347-1,579,093 | - | C1H5g00064 | C2H5g12807 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| CX5g037262 | 5:1,581,211-1,589,065 | - | C1H5g06759 | C2H5g15022 | - | - | - | Detail |
| CX5g040539 | 5:1,597,609-1,599,168 | + | C1H5g22859 | C2H5g11311 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| CX5g038241 | 5:1,601,147-1,603,060 | + | C1H5g07219 | C2H5g00026 | LOC_Os05g04160 | Os05g0132000 | - | Detail |
| CX5g039267 | 5:1,603,734-1,609,371 | - | C1H5g01586 | C2H5g29271 | LOC_Os05g04170 | Os05g0132100 | - | Detail |
| CX5g040727 | 5:1,624,641-1,628,342 | - | C1H5g08013 | C2H5g30600 | LOC_Os05g04180 | Os05g0132400 | - | Detail |
| CX5g039156 | 5:1,629,436-1,633,422 | - | C1H5g03405 | C2H5g03082 | LOC_Os05g04190 | Os05g0132500 | - | Detail |
| CX5g040630 | 5:1,634,850-1,635,339 | + | - | - | - | - | - | Detail |
| CX5g037816 | 5:1,652,065-1,653,480 | - | C1H5g18309 | C2H5g05589 | LOC_Os05g04210 | Os05g0132700 | Os2R_MYB52 | Detail |
| CX5g038861 | 5:1,664,901-1,667,694 | - | C1H5g29537 | C2H5g27002 | LOC_Os05g04220 | Os05g0133100 | - | Detail |
| CX5g036771 | 5:1,668,790-1,670,308 | + | C1H5g10914 | C2H5g26178 | LOC_Os05g04240 | Os05g0133401 | - | Detail |
| CX5g039957 | 5:1,674,321-1,684,582 | + | C1H5g20409 | C2H5g08606 | LOC_Os05g04330 | Os05g0133900 | - | Detail |
| CX5g040252 | 5:1,685,505-1,687,846 | - | C1H5g02098 | C2H5g20537 | LOC_Os05g04340 | Os05g0134000 | OsSK13 | Detail |
| CX5g038101 | 5:1,697,249-1,699,427 | + | C1H5g20836 | C2H5g03032 | LOC_Os05g04360 | Os05g0134200 | - | Detail |
| CX5g040147 | 5:1,701,171-1,705,201 | - | C1H5g08049 | C2H5g30196 | LOC_Os05g04370 | Os05g0134300 | - | Detail |
| CX5g040620 | 5:1,749,020-1,753,134 | - | C1H5g19346 | C2H5g03728 | LOC_Os05g04460 | Os05g0135100 | - | Detail |