| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g19487 | 2:8,685,424-8,687,308 | - | C2H2g28917 | CX2g019137 | LOC_Os02g16450 | Os02g0264300 | - | Detail |
| C1H2g26765 | 2:8,694,807-8,697,443 | + | C2H2g15600 | - | - | Os02g0264700 | - | Detail |
| C1H2g01441 | 2:8,702,187-8,703,926 | - | C2H2g19236 | CX2g020509 | LOC_Os02g16500 | Os02g0264800 | - | Detail |
| C1H2g05128 | 2:8,711,654-8,712,115 | + | - | - | - | - | - | Detail |
| C1H2g28048 | 2:8,723,167-8,724,489 | + | C2H2g18599 | CX2g020341 | - | Os02g0265200 | - | Detail |
| C1H2g03793 | 2:8,732,334-8,737,701 | - | C2H2g26523 | CX2g020464 | LOC_Os02g16550 | Os02g0265400 | - | Detail |
| C1H2g15000 | 2:8,745,946-8,746,570 | - | - | CX2g019005 | LOC_Os02g16560 | - | - | Detail |
| C1H2g08201 | 2:8,749,836-8,752,868 | + | C2H2g05519 | CX2g024020 | LOC_Os02g16600 | Os02g0265700 | - | Detail |
| C1H2g01209 | 2:8,755,583-8,757,261 | + | C2H2g05448 | CX2g024020 | LOC_Os02g16600 | - | - | Detail |
| C1H2g27807 | 2:8,758,465-8,759,079 | + | - | CX2g023820 | LOC_Os02g16610 | Os02g0265800 | - | Detail |
| C1H2g19593 | 2:8,760,609-8,763,308 | + | C2H2g08731 | CX2g018867 | LOC_Os02g16620 | Os02g0265900 | - | Detail |
| C1H2g16850 | 2:8,766,877-8,769,799 | + | C2H2g11052 | CX2g024509 | LOC_Os02g16630 | Os02g0266000 | - | Detail |
| C1H2g16838 | 2:8,770,792-8,774,201 | - | C2H2g16179 | CX2g020102 | LOC_Os02g16640 | Os02g0266100 | - | Detail |
| C1H2g07521 | 2:8,774,447-8,778,399 | + | C2H2g13852 | CX2g019119 | LOC_Os02g16650 | Os02g0266200 | - | Detail |
| C1H2g20133 | 2:8,778,804-8,782,759 | - | C2H2g26198 | CX2g019965 | LOC_Os02g16660 | Os02g0266300 | - | Detail |
| C1H2g02204 | 2:8,787,310-8,787,543 | + | C2H2g08908 | - | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| C1H2g23899 | 2:8,787,559-8,795,555 | + | C2H2g01743 | CX2g021513 | LOC_Os02g16670 | Os02g0266500 | - | Detail |
| C1H2g03225 | 2:8,799,390-8,802,359 | - | C2H2g25795 | CX2g020479 | LOC_Os02g16680 | Os02g0266800 | RISBZ3, RITA1, RITA-1, OsbZIP20 | Detail |
| C1H2g23328 | 2:8,807,993-8,808,664 | + | - | - | LOC_Os02g16690 | Os02g0266900 | - | Detail |
| C1H2g13207 | 2:8,811,686-8,815,416 | + | C2H2g08851 | CX2g020587 | LOC_Os02g16709 | Os02g0267000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040404 | 5:1,530,862-1,537,369 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g03972 | Os05g0130400 | - | Detail |
| CX5g040242 | 5:1,549,571-1,553,745 | - | C1H5g13927 | C2H5g17204 | LOC_Os05g04020 | Os05g0130400 | - | Detail |
| CX5g038388 | 5:1,554,499-1,554,978 | + | C1H5g19982 | C2H5g23034 | - | - | - | Detail |
| CX5g039763 | 5:1,561,986-1,563,560 | - | C1H5g31896 | C2H5g28718 | LOC_Os05g04060 | Os05g0131000 | - | Detail |
| CX5g041042 | 5:1,576,347-1,579,093 | - | C1H5g00064 | C2H5g12807 | LOC_Os05g04120 | Os05g0131500 | - | Detail |
| CX5g037262 | 5:1,581,211-1,589,065 | - | C1H5g06759 | C2H5g15022 | - | - | - | Detail |
| CX5g040539 | 5:1,597,609-1,599,168 | + | C1H5g22859 | C2H5g11311 | LOC_Os05g04150 | Os05g0131900 | - | Detail |
| CX5g038241 | 5:1,601,147-1,603,060 | + | C1H5g07219 | C2H5g00026 | LOC_Os05g04160 | Os05g0132000 | - | Detail |
| CX5g039267 | 5:1,603,734-1,609,371 | - | C1H5g01586 | C2H5g29271 | LOC_Os05g04170 | Os05g0132100 | - | Detail |
| CX5g040727 | 5:1,624,641-1,628,342 | - | C1H5g08013 | C2H5g30600 | LOC_Os05g04180 | Os05g0132400 | - | Detail |
| CX5g039156 | 5:1,629,436-1,633,422 | - | C1H5g03405 | C2H5g03082 | LOC_Os05g04190 | Os05g0132500 | - | Detail |
| CX5g040630 | 5:1,634,850-1,635,339 | + | - | - | - | - | - | Detail |
| CX5g037816 | 5:1,652,065-1,653,480 | - | C1H5g18309 | C2H5g05589 | LOC_Os05g04210 | Os05g0132700 | Os2R_MYB52 | Detail |
| CX5g038861 | 5:1,664,901-1,667,694 | - | C1H5g29537 | C2H5g27002 | LOC_Os05g04220 | Os05g0133100 | - | Detail |
| CX5g036771 | 5:1,668,790-1,670,308 | + | C1H5g10914 | C2H5g26178 | LOC_Os05g04240 | Os05g0133401 | - | Detail |
| CX5g039957 | 5:1,674,321-1,684,582 | + | C1H5g20409 | C2H5g08606 | LOC_Os05g04330 | Os05g0133900 | - | Detail |
| CX5g040252 | 5:1,685,505-1,687,846 | - | C1H5g02098 | C2H5g20537 | LOC_Os05g04340 | Os05g0134000 | OsSK13 | Detail |
| CX5g038101 | 5:1,697,249-1,699,427 | + | C1H5g20836 | C2H5g03032 | LOC_Os05g04360 | Os05g0134200 | - | Detail |
| CX5g040147 | 5:1,701,171-1,705,201 | - | C1H5g08049 | C2H5g30196 | LOC_Os05g04370 | Os05g0134300 | - | Detail |
| CX5g040620 | 5:1,749,020-1,753,134 | - | C1H5g19346 | C2H5g03728 | LOC_Os05g04460 | Os05g0135100 | - | Detail |