| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g14909 | 4:25,795,793-25,796,804 | + | C1H4g05924 | CX4g033777 | LOC_Os04g50700 | Os04g0593400 | - | Detail |
| C2H4g15239 | 4:25,799,292-25,800,259 | + | C1H4g05924 | CX4g033777 | LOC_Os04g50710 | Os04g0593500 | - | Detail |
| C2H4g23359 | 4:25,803,475-25,808,257 | + | C1H4g15568 | CX4g035875 | LOC_Os04g50720 | Os04g0593600 | - | Detail |
| C2H4g27782 | 4:25,808,778-25,812,733 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50730 | Os04g0593700 | - | Detail |
| C2H4g24933 | 4:25,813,998-25,815,152 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50730 | Os04g0593800 | - | Detail |
| C2H4g01969 | 4:25,815,562-25,818,187 | + | C1H4g31049 | CX4g035875 | LOC_Os04g50740 | Os04g0593600 | - | Detail |
| C2H4g15923 | 4:25,820,139-25,822,952 | - | C1H4g07130 | CX4g032893 | LOC_Os04g50760 | Os04g0594000 | - | Detail |
| C2H4g20252 | 4:25,826,062-25,827,494 | - | C1H4g24489 | CX4g036141 | LOC_Os04g50770 | Os04g0594100 | OsMYB58/63, RRS1 | Detail |
| C2H4g22220 | 4:25,840,544-25,840,933 | + | C1H4g12774 | CX4g032540 | LOC_Os04g50780 | - | - | Detail |
| C2H4g16603 | 4:25,841,774-25,846,519 | - | C1H4g03547 | CX4g032235 | LOC_Os04g50790 | Os04g0594400 | - | Detail |
| C2H4g10373 | 4:25,847,399-25,848,384 | - | C1H4g04447 | - | LOC_Os04g50810 | - | - | Detail |
| C2H4g30113 | 4:25,858,810-25,860,341 | - | C1H4g04447 | CX4g035659 | LOC_Os04g50800 | Os04g0594500 | - | Detail |
| C2H4g08190 | 4:25,861,172-25,861,957 | + | C1H4g17088 | CX4g036126 | LOC_Os04g40470 | Os04g0178400 | CYP99A3 | Detail |
| C2H4g20855 | 4:25,864,567-25,867,327 | + | C1H4g28401 | CX4g035919 | LOC_Os04g50820 | Os04g0594800 | - | Detail |
| C2H4g08661 | 4:25,867,878-25,870,782 | + | C1H4g12708 | CX4g031962 | LOC_Os04g50850 | Os04g0596200 | - | Detail |
| C2H4g13854 | 4:25,870,878-25,873,699 | - | C1H4g13631 | CX4g033700 | LOC_Os04g50860 | Os04g0596300 | - | Detail |
| C2H4g30104 | 4:25,874,640-25,876,517 | - | C1H4g13351 | CX4g035693 | LOC_Os04g50864 | Os04g0596400 | - | Detail |
| C2H4g29365 | 4:25,878,213-25,883,227 | - | C1H4g21153 | CX4g036181 | LOC_Os04g50870 | Os04g0596500 | - | Detail |
| C2H4g17490 | 4:25,890,490-25,892,055 | - | C1H4g02289 | CX4g032928 | LOC_Os04g50880 | Os04g0596900 | - | Detail |
| C2H4g16834 | 4:25,893,251-25,896,980 | - | C1H4g20724 | CX4g034929 | LOC_Os04g50890 | Os04g0597000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |