| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g15371 | 2:31,819,932-31,821,581 | - | C1H2g09762 | CX2g021880 | LOC_Os02g57110 | Os02g0816200 | - | Detail |
| C2H2g29121 | 2:31,835,228-31,844,256 | + | C1H2g03514 | CX2g019842 | LOC_Os02g57120 | Os02g0816300 | - | Detail |
| C2H2g15969 | 2:31,845,458-31,851,053 | + | C1H2g22705 | CX2g021019 | LOC_Os02g57140 | Os02g0816400 | - | Detail |
| C2H2g14831 | 2:31,857,801-31,859,343 | + | C1H2g08028 | CX2g020615 | LOC_Os02g57150 | Os02g0816500 | - | Detail |
| C2H2g13853 | 2:31,859,838-31,864,146 | - | C1H2g13297 | CX2g024238 | LOC_Os02g57160 | Os02g0816600 | - | Detail |
| C2H2g04727 | 2:31,865,145-31,866,836 | - | C1H2g29075 | CX2g021688 | LOC_Os02g57170 | Os02g0816700 | - | Detail |
| C2H2g17597 | 2:31,867,100-31,871,138 | + | C1H2g16275 | CX2g019354 | LOC_Os02g57180 | Os02g0816800 | OsNDUFA9, FLO13 | Detail |
| C2H2g26727 | 2:31,879,738-31,894,132 | + | C1H2g06133 | CX2g021988 | LOC_Os02g57190 | Os02g0816900 | OSMYOXIB | Detail |
| C2H2g04285 | 2:31,894,818-31,900,059 | + | C1H2g05881 | CX2g019948 | LOC_Os02g57200 | Os02g0817000 | - | Detail |
| C2H2g10819 | 2:31,904,658-31,906,075 | + | C1H2g01056 | CX2g024220 | LOC_Os02g57210 | - | - | Detail |
| C2H2g05620 | 2:31,908,819-31,913,722 | - | C1H2g12935 | CX2g024286 | LOC_Os02g57220 | Os02g0817200 | - | Detail |
| C2H2g26600 | 2:31,915,699-31,920,017 | + | C1H2g30239 | CX2g021309 | LOC_Os02g57240 | Os02g0817500 | - | Detail |
| C2H2g18662 | 2:31,921,422-31,923,136 | - | C1H2g30753 | CX2g020596 | LOC_Os02g57250 | Os02g0817600 | - | Detail |
| C2H2g25584 | 2:31,927,935-31,932,109 | - | C1H2g06843 | CX2g019038 | LOC_Os02g57260 | Os02g0817700 | - | Detail |
| C2H2g16029 | 2:31,933,026-31,937,461 | - | C1H2g21810 | CX2g019127 | LOC_Os02g57270 | Os02g0817800 | RTBP1, rtbp1, TBP1, OsTBP1 | Detail |
| C2H2g17783 | 2:31,939,273-31,940,680 | + | C1H2g00976 | CX2g024084 | LOC_Os02g57280 | Os02g0818000 | OsCBSX3 | Detail |
| C2H2g09230 | 2:31,940,206-31,951,495 | - | C1H2g14875 | CX2g022651 | LOC_Os02g57290 | Os02g0817900 | - | Detail |
| C2H2g21254 | 2:31,956,647-31,963,037 | - | C1H2g16141 | CX2g023430 | LOC_Os02g57305 | Os02g0818450 | - | Detail |
| C2H2g04028 | 2:31,964,403-31,966,879 | - | C1H2g18181 | CX2g023890 | LOC_Os02g57330 | Os02g0818700 | - | Detail |
| C2H2g08224 | 2:31,967,134-31,971,252 | + | C1H2g26889 | CX2g022489 | LOC_Os02g57340 | Os02g0818800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |