| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g08069 | 7:2,867,752-2,867,961 | + | C1H7g20770 | CX7g046410 | LOC_Os07g06190 | Os07g0156467 | - | Detail |
| C2H7g09918 | 7:2,870,653-2,871,408 | + | C1H7g16454 | CX7g048951 | LOC_Os07g06300 | Os07g0156467 | - | Detail |
| C2H7g30454 | 7:2,876,045-2,877,622 | - | C1H7g22924 | - | LOC_Os07g06390 | Os07g0157700 | - | Detail |
| C2H7g19895 | 7:2,877,977-2,878,257 | - | C1H7g06476 | - | - | - | - | Detail |
| C2H7g18578 | 7:2,880,477-2,884,375 | + | C1H7g22863 | CX7g049267 | LOC_Os07g06410 | Os07g0157900 | - | Detail |
| C2H7g14020 | 7:2,884,432-2,884,965 | + | C1H7g07818 | - | LOC_Os07g06420 | Os07g0158000 | - | Detail |
| C2H7g25102 | 7:2,887,740-2,891,176 | + | C1H7g22863 | CX7g049267 | LOC_Os07g06440 | Os07g0158200 | - | Detail |
| C2H7g19887 | 7:2,891,759-2,893,392 | - | C1H7g02643 | CX7g050246 | LOC_Os07g06450 | Os07g0158300 | - | Detail |
| C2H7g14892 | 7:2,893,804-2,894,355 | + | - | CX7g049779 | LOC_Os07g06460 | Os07g0158400 | - | Detail |
| C2H7g15754 | 7:2,896,740-2,899,167 | - | C1H7g15593 | CX7g049108 | LOC_Os07g06470 | Os07g0158500 | OsNF-YA5, HAP2J | Detail |
| C2H7g01924 | 7:2,920,618-2,922,823 | - | C1H7g02820 | CX7g046696 | LOC_Os07g06490 | Os07g0158800 | - | Detail |
| C2H7g18089 | 7:2,924,465-2,927,404 | - | C1H7g07397 | CX7g050343 | LOC_Os07g06500 | Os07g0158900 | - | Detail |
| C2H7g14307 | 7:2,934,822-2,938,375 | - | C1H7g13625 | CX7g048728 | LOC_Os07g06550 | Os07g0159500 | - | Detail |
| C2H7g20897 | 7:2,939,777-2,940,334 | + | C1H7g10696 | CX7g050014 | LOC_Os07g06560 | Os07g0159600 | - | Detail |
| C2H7g04198 | 7:2,941,039-2,943,027 | - | C1H7g22938 | CX7g046097 | LOC_Os07g06570 | Os07g0159700 | - | Detail |
| C2H7g29566 | 7:2,949,791-2,952,956 | + | C1H7g17805 | CX7g049953 | LOC_Os07g06590 | Os07g0159800 | - | Detail |
| C2H7g23386 | 7:2,954,583-2,956,964 | + | C1H7g25009 | CX7g047897 | LOC_Os07g06600 | Os07g0159900 | - | Detail |
| C2H7g00845 | 7:2,958,020-2,965,046 | + | C1H7g21339 | CX7g050126 | LOC_Os07g06610 | Os07g0160000 | - | Detail |
| C2H7g20693 | 7:2,973,650-2,981,034 | + | C1H7g04752 | CX7g047043 | LOC_Os07g06620 | Os07g0160100 | - | Detail |
| C2H7g17130 | 7:2,994,224-2,996,834 | + | C1H7g02883 | CX7g048609 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |