| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g15570 | 7:239,306-240,701 | + | C1H7g19239 | CX7g049270 | LOC_Os07g01420 | Os07g0104233 | - | Detail |
| C2H7g14940 | 7:246,021-246,719 | + | C1H7g29602 | CX7g047288 | LOC_Os07g01440 | Os07g0105000 | - | Detail |
| C2H7g29086 | 7:247,771-249,399 | - | - | CX7g048453 | LOC_Os07g01450 | Os07g0105100 | - | Detail |
| C2H7g17514 | 7:254,584-256,198 | + | C1H7g06461 | CX7g050372 | LOC_Os07g01460 | Os07g0105200 | - | Detail |
| C2H7g22737 | 7:257,862-258,362 | + | - | CX7g049875 | LOC_Os07g01470 | - | - | Detail |
| C2H7g07068 | 7:257,879-258,379 | - | - | CX7g046087 | - | Os07g0105300 | - | Detail |
| C2H7g05527 | 7:260,994-261,928 | + | C1H7g04166 | CX7g050363 | LOC_Os07g01480 | Os07g0105600 | - | Detail |
| C2H7g20042 | 7:262,075-267,079 | - | C1H7g10723 | CX7g049489 | LOC_Os07g01490 | Os07g0105700 | OsDLK | Detail |
| C2H7g10727 | 7:270,987-273,428 | + | C1H7g31044 | CX7g048391 | LOC_Os07g01520 | Os07g0105800 | - | Detail |
| C2H7g01843 | 7:276,582-278,093 | - | C1H7g05204 | CX7g047213 | LOC_Os07g01530 | Os07g0105900 | - | Detail |
| C2H7g10501 | 7:278,524-287,565 | - | C1H7g01050 | CX7g049849 | LOC_Os07g01540 | Os07g0106000 | - | Detail |
| C2H7g19423 | 7:287,020-292,134 | + | C1H7g14581 | CX7g050084 | LOC_Os07g01550 | Os07g0106100 | - | Detail |
| C2H7g23480 | 7:292,231-296,723 | - | C1H7g03564 | CX7g049440 | LOC_Os07g01560 | Os07g0106200 | - | Detail |
| C2H7g09195 | 7:306,891-307,932 | - | C1H7g16872 | CX7g050406 | LOC_Os07g01580 | - | - | Detail |
| C2H7g24486 | 7:316,190-316,765 | + | C1H7g23467 | CX7g048594 | LOC_Os07g01600 | Os07g0106700 | - | Detail |
| C2H7g23658 | 7:320,199-320,885 | + | C1H7g18364 | CX7g048281 | LOC_Os07g01620 | Os07g0106900 | - | Detail |
| C2H7g02692 | 7:322,201-322,824 | + | C1H7g22555 | CX7g049947 | LOC_Os07g01620 | Os07g0107100 | - | Detail |
| C2H7g12656 | 7:325,570-326,259 | - | C1H7g22555 | CX7g048047 | LOC_Os07g01660 | Os07g0107300 | - | Detail |
| C2H7g08241 | 7:332,822-333,478 | - | C1H7g17792 | CX7g049558 | LOC_Os07g01680 | Os07g0107300 | - | Detail |
| C2H7g09963 | 7:347,708-354,204 | + | C1H7g25371 | CX7g046133 | LOC_Os07g01710 | Os07g0107800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |