| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g18674 | 6:3,124,008-3,124,442 | - | C1H6g27514 | CX6g044131 | LOC_Os06g08130 | - | - | Detail |
| C2H6g30178 | 6:3,125,265-3,129,195 | - | C1H6g12023 | CX6g042305 | LOC_Os06g08140 | Os06g0179700 | - | Detail |
| C2H6g11242 | 6:3,135,396-3,139,434 | - | C1H6g05114 | CX6g041452 | LOC_Os06g08154 | Os06g0179800 | - | Detail |
| C2H6g07642 | 6:3,141,338-3,143,694 | - | C1H6g10380 | CX6g041526 | LOC_Os06g08170 | Os06g0179900 | - | Detail |
| C2H6g22837 | 6:3,145,212-3,148,741 | - | C1H6g06749 | CX6g042763 | LOC_Os06g08180 | Os06g0180000 | - | Detail |
| C2H6g04280 | 6:3,151,641-3,152,681 | - | - | - | - | - | - | Detail |
| C2H6g27126 | 6:3,157,998-3,158,368 | - | - | CX6g043669 | LOC_Os06g08210 | - | - | Detail |
| C2H6g28565 | 6:3,161,007-3,161,565 | - | C1H6g07430 | CX6g045176 | LOC_Os06g08220 | Os06g0180300 | - | Detail |
| C2H6g08735 | 6:3,163,669-3,164,138 | - | C1H6g29780 | CX6g044282 | LOC_Os06g08230 | Os06g0180300 | - | Detail |
| C2H6g22906 | 6:3,171,064-3,172,106 | - | C1H6g31881 | CX6g045023 | LOC_Os06g08250 | Os06g0101300 | - | Detail |
| C2H6g15077 | 6:3,193,159-3,198,484 | + | C1H6g31540 | CX6g043418 | LOC_Os06g08280 | Os06g0181200 | - | Detail |
| C2H6g07474 | 6:3,200,469-3,203,352 | + | C1H6g07800 | CX6g043325 | LOC_Os06g08290 | Os06g0181300 | AID1, OsMYBR57 | Detail |
| C2H6g15863 | 6:3,204,758-3,207,541 | + | C1H6g28575 | CX6g042874 | LOC_Os06g08300 | Os06g0181400 | - | Detail |
| C2H6g07530 | 6:3,208,982-3,211,672 | - | C1H6g30964 | CX6g043969 | LOC_Os06g08310 | Os06g0181500 | - | Detail |
| C2H6g22978 | 6:3,215,001-3,218,671 | - | C1H6g17611 | CX6g044511 | LOC_Os06g08320 | Os06g0181566 | - | Detail |
| C2H6g26833 | 6:3,223,335-3,224,134 | + | C1H6g05796 | CX6g043575 | LOC_Os06g08340 | Os06g0181700 | OsERF2 | Detail |
| C2H6g06138 | 6:3,229,161-3,229,786 | - | C1H6g25189 | CX6g042753 | LOC_Os06g10310 | Os06g0204800 | - | Detail |
| C2H6g03836 | 6:3,229,820-3,230,074 | - | C1H6g05224 | CX6g042866 | - | Os06g0102100 | CYP93G2, CYP93G2, OsF2H | Detail |
| C2H6g03373 | 6:3,236,348-3,237,505 | + | - | CX6g043579 | LOC_Os06g08350 | Os06g0181800 | - | Detail |
| C2H6g04140 | 6:3,249,213-3,250,115 | - | C1H6g07696 | CX6g044144 | LOC_Os06g08360 | Os06g0182100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |