| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g10500 | 1:22,518,437-22,527,127 | + | C2H1g29248 | CX1g004459 | LOC_Os01g43630 | Os01g0626200 | - | Detail |
| C1H1g23387 | 1:22,528,112-22,528,354 | - | C2H1g04282 | CX1g003074 | - | Os01g0626300 | - | Detail |
| C1H1g04034 | 1:22,533,329-22,535,563 | + | C2H1g17198 | CX1g001615 | LOC_Os01g43650 | Os01g0626400 | WRKY11, OsWRKY11.2 | Detail |
| C1H1g18400 | 1:22,559,207-22,560,696 | + | C2H1g04147 | CX1g002724 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C1H1g01575 | 1:22,561,176-22,562,074 | + | C2H1g04147 | CX1g003827 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C1H1g28702 | 1:22,563,931-22,567,603 | - | C2H1g19850 | CX1g002724 | LOC_Os01g43710 | Os01g0627500 | - | Detail |
| C1H1g25990 | 1:22,574,890-22,575,992 | - | C2H1g29868 | CX1g006577 | LOC_Os01g43774 | Os01g0602200 | CYP72A31 | Detail |
| C1H1g03097 | 1:22,576,399-22,577,274 | - | C2H1g29868 | CX1g006577 | LOC_Os01g43720 | Os01g0627600 | - | Detail |
| C1H1g04951 | 1:22,580,563-22,583,125 | + | C2H1g22502 | CX1g003827 | LOC_Os01g43740 | Os01g0627800 | - | Detail |
| C1H1g09293 | 1:22,586,136-22,588,042 | + | C2H1g27924 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C1H1g30037 | 1:22,590,557-22,591,439 | + | C2H1g27924 | CX1g006577 | LOC_Os01g43760 | Os01g0627933 | - | Detail |
| C1H1g21900 | 1:22,596,246-22,598,309 | + | C2H1g07157 | CX1g006577 | LOC_Os01g43774 | Os01g0628000 | - | Detail |
| C1H1g04171 | 1:22,612,169-22,613,533 | + | - | - | - | - | - | Detail |
| C1H1g21541 | 1:22,617,418-22,622,164 | + | C2H1g04659 | CX1g003827 | LOC_Os01g43844 | Os01g0628700 | - | Detail |
| C1H1g06376 | 1:22,623,681-22,625,714 | + | C2H1g09539 | CX1g003827 | LOC_Os01g43851 | Os01g0628900 | - | Detail |
| C1H1g08197 | 1:22,630,305-22,636,761 | + | C2H1g01356 | CX1g000972 | LOC_Os01g43870 | Os01g0629400 | - | Detail |
| C1H1g14568 | 1:22,646,983-22,653,155 | - | C2H1g07937 | CX1g006840 | LOC_Os01g43910 | Os01g0629900 | - | Detail |
| C1H1g00799 | 1:22,685,857-22,692,715 | + | C2H1g22336 | CX1g005258 | LOC_Os01g44040 | Os01g0631100 | - | Detail |
| C1H1g26941 | 1:22,693,595-22,696,640 | + | C2H1g25630 | CX1g002535 | LOC_Os01g44050 | Os01g0631200 | - | Detail |
| C1H1g05926 | 1:22,714,745-22,721,428 | + | C2H1g14517 | CX1g001624 | LOC_Os01g44069 | Os01g0631400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |