| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g23729 | 2:6,876,844-6,877,198 | - | C2H2g23679 | - | LOC_Os02g13630 | Os02g0230000 | - | Detail |
| C1H2g06642 | 2:6,878,999-6,882,336 | + | C2H2g16687 | CX2g019397 | LOC_Os02g13640 | Os02g0230100 | - | Detail |
| C1H2g23074 | 2:6,884,480-6,885,532 | + | - | CX2g023887 | LOC_Os02g13650 | Os02g0230200 | - | Detail |
| C1H2g30749 | 2:6,887,044-6,888,962 | - | C2H2g04097 | CX2g023129 | LOC_Os02g13660 | Os02g0230300 | RA68 | Detail |
| C1H2g30268 | 2:6,897,806-6,898,749 | - | C2H2g00325 | CX2g024196 | LOC_Os02g13670 | - | - | Detail |
| C1H2g00083 | 2:6,903,621-6,904,205 | - | - | CX2g023609 | - | - | - | Detail |
| C1H2g26929 | 2:6,924,832-6,925,621 | - | C2H2g10682 | - | - | Os02g0230875 | - | Detail |
| C1H2g22450 | 2:6,984,030-6,984,658 | - | C2H2g21959 | CX2g019086 | LOC_Os02g13760 | Os02g0725500 | - | Detail |
| C1H2g27239 | 2:6,986,265-6,987,525 | + | C2H2g01859 | CX2g021884 | LOC_Os02g13770 | Os02g0231600 | - | Detail |
| C1H2g28848 | 2:6,989,235-6,993,126 | - | C2H2g22684 | CX2g023939 | LOC_Os02g13780 | Os02g0231700 | - | Detail |
| C1H2g20826 | 2:7,013,902-7,014,858 | + | C2H2g20008 | CX2g024068 | LOC_Os02g13800 | Os02g0232000 | - | Detail |
| C1H2g21921 | 2:7,018,179-7,020,847 | - | C2H2g19547 | CX2g021073 | LOC_Os02g13810 | Os02g0232100 | HEI10, OsHEI10, HEI10B | Detail |
| C1H2g18519 | 2:7,036,178-7,037,630 | + | C2H2g15574 | CX2g021822 | LOC_Os02g13830 | Os02g0232300 | - | Detail |
| C1H2g06533 | 2:7,044,071-7,049,700 | + | C2H2g18136 | CX2g020086 | LOC_Os02g13840 | Os02g0232400 | - | Detail |
| C1H2g27528 | 2:7,055,088-7,066,688 | + | C2H2g14698 | CX2g021225 | LOC_Os02g13850 | Os02g0232500 | - | Detail |
| C1H2g13250 | 2:7,067,810-7,070,531 | - | C2H2g19645 | CX2g024919 | LOC_Os02g13870 | Os02g0232900 | OsNIP1;1 | Detail |
| C1H2g30546 | 2:7,095,402-7,098,606 | + | C2H2g22601 | CX2g023489 | LOC_Os02g13890 | Os02g0233100 | OsFYVE4 | Detail |
| C1H2g28987 | 2:7,115,064-7,119,411 | + | C2H2g22601 | CX2g019364 | LOC_Os02g13890 | Os02g0233100 | OsFYVE4 | Detail |
| C1H2g21840 | 2:7,120,738-7,123,868 | - | C2H2g04696 | CX2g024004 | LOC_Os02g13900 | Os02g0233200 | OsBES1-4 | Detail |
| C1H2g10759 | 2:7,132,853-7,134,646 | - | - | CX2g024437 | LOC_Os02g13910 | Os02g0233333 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |