| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g04994 | 11:465,524-467,926 | + | C2H12g14425 | CX11g011599 | LOC_Os11g01860 | Os11g0109800 | - | Detail |
| C1H11g26109 | 11:468,584-472,665 | - | C2H11g27272 | CX11g013734 | LOC_Os11g01869 | Os11g0109900 | OsDRB1a | Detail |
| C1H11g14401 | 11:473,615-483,320 | - | C2H11g25777 | CX11g013734 | LOC_Os11g01872 | Os11g0109933 | - | Detail |
| C1H11g21141 | 11:485,317-494,985 | - | C2H11g23978 | CX11g012061 | LOC_Os11g01880 | Os11g0110000 | - | Detail |
| C1H11g27669 | 11:495,126-497,571 | + | C2H11g00148 | CX11g013593 | LOC_Os11g01890 | Os11g0110100 | - | Detail |
| C1H11g01508 | 11:510,490-513,280 | + | C2H11g10994 | CX11g014978 | LOC_Os11g02054 | Os11g0111800 | - | Detail |
| C1H11g25556 | 11:513,608-515,209 | - | C2H11g29513 | CX11g012495 | LOC_Os11g02070 | Os11g0111900 | - | Detail |
| C1H11g05258 | 11:518,482-518,892 | - | C2H11g27999 | CX11g011689 | LOC_Os11g02080 | Os11g0112000 | - | Detail |
| C1H11g16863 | 11:521,019-522,893 | + | C2H11g11808 | CX11g011933 | LOC_Os12g02050 | Os11g0112100 | - | Detail |
| C1H11g29054 | 11:524,910-526,437 | + | C2H11g13559 | CX11g014840 | LOC_Os11g02100 | Os11g0112200 | - | Detail |
| C1H11g21558 | 11:527,367-528,137 | - | C2H11g02861 | CX12g016960 | LOC_Os11g02110 | Os11g0112300 | - | Detail |
| C1H11g15910 | 11:540,098-542,596 | + | C2H11g14551 | CX11g013302 | LOC_Os11g02130 | Os11g0112400 | - | Detail |
| C1H11g08897 | 11:543,876-546,915 | + | C2H11g20743 | CX11g012884 | LOC_Os11g02140 | - | - | Detail |
| C1H11g27143 | 11:546,886-547,260 | - | - | - | - | Os11g0112650 | - | Detail |
| C1H11g20772 | 11:547,780-550,371 | + | C2H11g05155 | CX11g011002 | LOC_Os11g02150 | Os11g0112800 | - | Detail |
| C1H11g20039 | 11:551,883-557,414 | + | C2H11g10788 | CX11g012791 | LOC_Os11g02159 | Os11g0112900 | - | Detail |
| C1H11g31623 | 11:557,870-558,834 | + | C2H11g01512 | CX11g012341 | LOC_Os11g02165 | Os12g0112401 | - | Detail |
| C1H11g05638 | 11:559,255-562,868 | - | C2H11g09703 | CX11g012318 | LOC_Os11g02180 | Os11g0113100 | - | Detail |
| C1H11g08665 | 11:565,627-571,305 | + | C2H11g09486 | CX11g014121 | LOC_Os11g02190 | Os11g0113200 | - | Detail |
| C1H11g24295 | 11:574,496-576,184 | + | C2H11g00534 | CX11g013718 | LOC_Os11g02200 | Os11g0113300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |