| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g07601 | 9:12,897,800-12,898,200 | - | C2H9g03164 | CX9g057147 | LOC_Os09g25980 | Os09g0428600 | - | Detail |
| C1H9g12384 | 9:12,900,452-12,901,284 | - | C2H12g26650 | CX12g016337 | - | - | - | Detail |
| C1H9g28274 | 9:12,902,422-12,907,716 | - | C2H9g24731 | CX9g057147 | LOC_Os09g25960 | Os09g0429000 | - | Detail |
| C1H9g10048 | 9:12,911,772-12,912,437 | + | C2H9g22878 | - | LOC_Os09g25970 | Os09g0429100 | - | Detail |
| C1H9g18274 | 9:12,912,924-12,920,290 | - | C2H9g26261 | CX9g057147 | LOC_Os09g25980 | Os09g0429200 | OsGLR2.1 | Detail |
| C1H9g29817 | 9:12,923,516-12,923,957 | + | C2H9g23122 | - | - | Os09g0429350 | - | Detail |
| C1H9g15914 | 9:12,925,608-12,930,092 | - | C2H9g23326 | CX9g057147 | LOC_Os09g25990 | Os09g0429400 | - | Detail |
| C1H9g09559 | 9:12,939,587-12,944,927 | - | C2H9g03503 | CX9g057147 | LOC_Os09g26000 | Os09g0429500 | - | Detail |
| C1H9g25608 | 9:12,965,375-12,965,758 | + | - | CX9g058048 | LOC_Os09g26100 | Os09g0430600 | - | Detail |
| C1H9g02010 | 9:12,997,647-13,008,431 | + | C2H9g06468 | CX9g057801 | LOC_Os09g26144 | Os09g0431100 | - | Detail |
| C1H9g27927 | 9:13,012,118-13,016,624 | + | C2H9g12498 | CX9g056520 | LOC_Os09g26160 | Os09g0431200 | OsGLR9.8 | Detail |
| C1H9g29049 | 9:13,017,384-13,018,724 | - | C2H9g14183 | CX9g057258 | LOC_Os09g26170 | Os09g0431300 | Os2R_MYB84 | Detail |
| C1H9g29882 | 9:13,028,136-13,030,771 | - | C2H9g01441 | CX9g057406 | LOC_Os09g26180 | Os09g0431500 | - | Detail |
| C1H9g05545 | 9:13,036,320-13,045,498 | + | C2H9g20772 | CX9g057888 | LOC_Os09g26190 | Os09g0431600 | - | Detail |
| C1H9g25327 | 9:13,055,306-13,055,713 | - | - | CX9g056629 | LOC_Os09g26200 | Os09g0431750 | - | Detail |
| C1H9g29816 | 9:13,075,706-13,076,191 | - | - | CX9g057666 | LOC_Os09g26210 | Os09g0431900 | - | Detail |
| C1H9g17725 | 9:13,086,977-13,088,003 | - | C2H1g14512 | CX9g057738 | - | Os11g0485000 | - | Detail |
| C1H9g23584 | 9:13,109,324-13,110,874 | - | - | CX9g058015 | LOC_Os09g26260 | Os09g0432300 | - | Detail |
| C1H9g26234 | 9:13,128,759-13,129,748 | - | C2H9g11992 | CX9g055649 | LOC_Os09g26300 | Os09g0432900 | - | Detail |
| C1H9g08796 | 9:13,133,568-13,134,530 | - | C2H9g11992 | CX9g055514 | LOC_Os09g26310 | Os09g0432900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040806 | 5:1,400,665-1,400,913 | - | - | - | - | - | - | Detail |
| CX5g037246 | 5:1,408,796-1,410,610 | + | C1H5g07604 | C2H5g01621 | LOC_Os05g03760 | Os05g0128200 | - | Detail |
| CX5g039214 | 5:1,413,280-1,415,249 | - | C1H5g14002 | C2H5g10735 | LOC_Os05g03770 | Os05g0128300 | - | Detail |
| CX5g038112 | 5:1,421,166-1,424,344 | - | C1H5g27203 | C2H5g15512 | LOC_Os05g03780 | Os05g0128400 | OsMTP1 | Detail |
| CX5g038478 | 5:1,430,587-1,430,751 | - | - | - | - | - | - | Detail |
| CX5g037955 | 5:1,432,212-1,432,370 | + | - | - | - | - | - | Detail |
| CX5g039031 | 5:1,436,510-1,437,082 | - | - | - | - | - | - | Detail |
| CX5g037779 | 5:1,440,417-1,444,194 | + | C1H5g26071 | C2H5g12644 | LOC_Os05g03820 | Os05g0129000 | - | Detail |
| CX5g036800 | 5:1,447,739-1,449,602 | + | C1H5g17726 | C2H5g20670 | LOC_Os05g03830 | Os05g0129100 | - | Detail |
| CX5g040768 | 5:1,449,900-1,452,255 | - | C1H5g20738 | C2H5g08741 | LOC_Os05g03840 | Os05g0129200 | - | Detail |
| CX5g040505 | 5:1,454,472-1,454,625 | + | - | - | - | Os05g0172000 | - | Detail |
| CX5g039316 | 5:1,459,771-1,460,253 | - | - | - | - | - | - | Detail |
| CX5g038529 | 5:1,463,824-1,471,005 | + | C1H5g06409 | C2H5g12888 | - | Os05g0575400 | - | Detail |
| CX5g038179 | 5:1,474,143-1,479,862 | - | C1H5g14331 | C2H5g24745 | LOC_Os05g03884 | Os05g0129700 | Oskn2, OSH71, Oskn2/OSH71 | Detail |
| CX5g037378 | 5:1,488,862-1,489,014 | - | - | - | - | - | - | Detail |
| CX5g037909 | 5:1,493,520-1,494,358 | + | C1H5g11198 | C2H5g10940 | LOC_Os05g03900 | Os05g0129800 | - | Detail |
| CX5g038918 | 5:1,495,052-1,501,021 | - | C1H5g15292 | C2H5g13765 | LOC_Os05g03910 | Os05g0129900 | - | Detail |
| CX5g037263 | 5:1,500,833-1,502,059 | + | C1H3g03993 | C2H5g03241 | LOC_Os12g34990 | Os12g0535400 | - | Detail |
| CX5g036768 | 5:1,506,256-1,510,031 | + | C1H5g09306 | C2H5g20349 | LOC_Os05g03920 | Os05g0130100 | - | Detail |
| CX5g036838 | 5:1,516,301-1,516,531 | + | - | - | LOC_Os05g03934 | Os05g0130200 | - | Detail |