| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g16127 | 10:19,714,317-19,718,581 | + | - | - | - | - | - | Detail |
| C2H10g21795 | 10:19,723,016-19,723,748 | - | - | - | - | - | - | Detail |
| C2H10g03378 | 10:19,723,909-19,724,781 | - | - | CX10g009910 | LOC_Os10g40584 | Os10g0554001 | - | Detail |
| C2H10g02267 | 10:19,731,943-19,737,400 | + | C1H10g18964 | CX10g007550 | LOC_Os10g40590 | Os10g0554100 | - | Detail |
| C2H10g07153 | 10:19,738,712-19,744,037 | - | C1H10g16439 | CX10g009390 | LOC_Os10g40600 | Os10g0554200 | NRT1.1B, OsNRT1.1B, OsNPF6.5, NPF6.5 | Detail |
| C2H10g19889 | 10:19,757,452-19,759,520 | - | C1H10g00556 | CX10g008553 | LOC_Os10g40610 | Os10g0554300 | - | Detail |
| C2H10g18300 | 10:19,762,068-19,762,574 | + | C1H10g19113 | - | LOC_Os10g40614 | Os10g0552700 | - | Detail |
| C2H10g14918 | 10:19,763,633-19,766,081 | - | C1H10g29784 | CX10g010159 | LOC_Os10g40620 | Os10g0554900 | - | Detail |
| C2H10g03186 | 10:19,776,793-19,779,963 | + | C1H10g17774 | CX10g008244 | LOC_Os10g40640 | Os10g0555100 | OsGGT | Detail |
| C2H10g17492 | 10:19,780,579-19,782,118 | - | C1H10g15921 | CX10g007995 | LOC_Os10g40650 | Os10g0555200 | - | Detail |
| C2H10g25195 | 10:19,787,598-19,788,680 | - | - | CX10g008856 | LOC_Os10g40660 | Os10g0555300 | - | Detail |
| C2H10g04919 | 10:19,806,433-19,807,549 | - | C1H10g19120 | CX10g007989 | LOC_Os10g40700 | Os10g0555600 | - | Detail |
| C2H10g20347 | 10:19,812,275-19,813,512 | - | C1H10g16993 | CX10g007911 | LOC_Os10g40710 | Os10g0555700 | OsEXPB2 | Detail |
| C2H10g20545 | 10:19,825,862-19,827,776 | - | C1H10g15903 | CX10g010453 | LOC_Os10g40720 | Os10g0555900 | OsEXPB3 | Detail |
| C2H10g17527 | 10:19,839,684-19,842,118 | + | C1H10g31280 | CX10g008461 | LOC_Os10g40730 | Os10g0556100 | - | Detail |
| C2H10g17829 | 10:19,845,427-19,849,262 | - | C1H10g11805 | CX10g009492 | LOC_Os10g40740 | Os10g0556200 | - | Detail |
| C2H10g30183 | 10:19,857,549-19,858,001 | + | - | - | - | Os10g0556500 | - | Detail |
| C2H10g14014 | 10:19,860,719-19,879,904 | - | C1H10g29962 | CX10g008043 | LOC_Os10g40780 | Os10g0556700 | OsNOT1 | Detail |
| C2H10g09074 | 10:19,897,157-19,898,524 | + | C1H10g24304 | CX10g010658 | LOC_Os10g40810 | Os10g0557600 | OsGATA7 | Detail |
| C2H10g12261 | 10:19,905,567-19,906,652 | - | C1H10g12942 | CX10g010083 | LOC_Os10g40830 | Os10g0557900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g039699 | 5:1,074,173-1,074,370 | - | - | - | - | - | - | Detail |
| CX5g037693 | 5:1,075,471-1,075,632 | + | - | - | - | - | - | Detail |
| CX5g040056 | 5:1,078,828-1,085,670 | + | C1H5g13312 | C2H5g19920 | LOC_Os05g03100 | Os05g0122400 | - | Detail |
| CX5g040504 | 5:1,087,005-1,088,486 | - | C1H5g19743 | C2H5g29150 | LOC_Os05g03110 | Os05g0122500 | - | Detail |
| CX5g039706 | 5:1,098,339-1,099,345 | + | C1H6g16587 | C2H5g07853 | LOC_Os01g26980 | - | - | Detail |
| CX5g040699 | 5:1,107,060-1,107,224 | + | - | - | - | - | - | Detail |
| CX5g037677 | 5:1,109,395-1,112,331 | + | C1H5g02473 | C2H5g04039 | LOC_Os05g03120 | Os05g0122600 | - | Detail |
| CX5g039466 | 5:1,124,447-1,127,994 | + | C1H5g28175 | C2H5g02194 | LOC_Os05g03140 | Os05g0122800 | - | Detail |
| CX5g037843 | 5:1,131,156-1,131,536 | - | C1H5g12318 | C2H5g07267 | LOC_Os05g03150 | Os05g0122900 | OsBLE1 | Detail |
| CX5g040830 | 5:1,136,264-1,136,689 | - | C1H5g28350 | C2H5g27198 | LOC_Os05g03160 | Os05g0123000 | - | Detail |
| CX5g040717 | 5:1,136,736-1,137,005 | - | C1H5g07212 | C2H5g14651 | LOC_Os05g07270 | Os05g0417000 | - | Detail |
| CX5g041100 | 5:1,149,464-1,154,727 | + | C1H5g30581 | C2H5g07168 | LOC_Os05g03174 | Os05g0123100 | OsGT43A | Detail |
| CX5g039819 | 5:1,162,098-1,165,218 | + | C1H5g23427 | C2H5g22807 | LOC_Os05g03190 | Os05g0123200 | - | Detail |
| CX5g040457 | 5:1,165,972-1,168,731 | - | C1H5g08812 | C2H5g07657 | LOC_Os05g03200 | Os05g0123300 | - | Detail |
| CX5g036952 | 5:1,170,708-1,172,214 | - | C1H5g19342 | C2H5g22124 | - | Os05g0123400 | - | Detail |
| CX5g038760 | 5:1,202,920-1,206,530 | - | C1H5g23275 | C2H5g13999 | LOC_Os05g03320 | Os05g0124000 | - | Detail |
| CX5g041129 | 5:1,210,444-1,210,746 | + | - | - | - | - | - | Detail |
| CX5g038403 | 5:1,218,834-1,220,520 | - | C1H5g22928 | C2H5g29581 | LOC_Os05g03410 | Os05g0124800 | - | Detail |
| CX5g041143 | 5:1,228,210-1,239,144 | + | C1H5g31600 | C2H5g09329 | LOC_Os05g03430 | Os05g0125000 | SIZ1, OsSIZ1 | Detail |
| CX5g038001 | 5:1,237,562-1,237,915 | - | - | - | - | Os05g0125050 | - | Detail |