| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g29234 | 3:9,589,591-9,592,789 | + | C1H3g09918 | CX3g029447 | LOC_Os03g19300 | Os03g0305700 | - | Detail |
| C2H3g25404 | 3:9,593,061-9,594,512 | - | C1H3g15276 | CX3g025751 | LOC_Os03g19310 | Os03g0305800 | - | Detail |
| C2H3g04492 | 3:9,605,909-9,607,258 | + | C1H3g04998 | CX3g029664 | LOC_Os03g19330 | Os03g0306100 | - | Detail |
| C2H3g27650 | 3:9,608,099-9,625,295 | - | C1H3g22410 | CX3g028723 | LOC_Os03g19340 | Os03g0306200 | - | Detail |
| C2H3g07435 | 3:9,627,515-9,639,295 | - | C1H3g02755 | CX3g027549 | LOC_Os03g19350 | Os03g0306400 | - | Detail |
| C2H3g20582 | 3:9,647,619-9,648,140 | + | C1H3g18574 | CX3g026074 | LOC_Os03g19375 | Os03g0239400 | - | Detail |
| C2H3g07871 | 3:9,651,461-9,651,847 | + | C1H3g08148 | CX3g027392 | LOC_Os03g19380 | Os03g0306800 | - | Detail |
| C2H3g26352 | 3:9,652,500-9,654,378 | - | C1H3g23949 | CX3g025960 | LOC_Os03g19390 | Os03g0306900 | - | Detail |
| C2H3g08753 | 3:9,654,788-9,656,681 | + | C1H3g18672 | CX3g025770 | LOC_Os03g19400 | Os03g0307000 | - | Detail |
| C2H3g28158 | 3:9,658,647-9,666,875 | + | C1H3g26919 | CX3g025641 | LOC_Os03g19410 | Os03g0307100 | - | Detail |
| C2H3g27859 | 3:9,667,653-9,668,684 | + | C1H3g07326 | CX3g028955 | LOC_Os03g19427 | Os03g0307300 | - | Detail |
| C2H3g23633 | 3:9,672,964-9,675,855 | - | C1H3g08713 | CX3g027893 | LOC_Os03g19420 | Os03g0307200 | NAS2, OsNAS2 | Detail |
| C2H3g12347 | 3:9,680,537-9,681,031 | + | C1H3g12875 | CX3g027748 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g00214 | 3:9,683,277-9,684,485 | + | C1H3g10945 | CX3g025182 | LOC_Os03g19452 | Os03g0307400 | - | Detail |
| C2H3g27228 | 3:9,684,900-9,688,173 | + | C1H3g01117 | CX3g028724 | LOC_Os03g19462 | - | - | Detail |
| C2H3g27622 | 3:9,690,908-9,693,250 | + | C1H3g07984 | CX3g026010 | LOC_Os03g19470 | Os03g0307700 | - | Detail |
| C2H3g03655 | 3:9,693,645-9,700,852 | - | C1H3g00240 | CX3g031316 | LOC_Os03g19480 | Os03g0307800 | IEZ1, OsiEZ1, OsSET1, SET1, iEZ1, OsEZ1/OsiEZ1, OsEZ1, EZ1, ez1, OsSET15, SDG718 | Detail |
| C2H3g06844 | 3:9,702,422-9,702,951 | + | C1H3g04726 | CX3g025615 | LOC_Os03g13830 | Os03g0307900 | - | Detail |
| C2H3g23976 | 3:9,704,003-9,706,653 | + | C1H3g19730 | CX3g024948 | LOC_Os03g19500 | Os03g0308000 | SMG3 | Detail |
| C2H3g08220 | 3:9,708,308-9,710,749 | - | C1H3g14154 | CX3g029346 | LOC_Os03g19510 | Os03g0308100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040523 | 5:917,514-922,736 | + | - | C2H5g16207 | - | - | - | Detail |
| CX5g038722 | 5:928,055-929,982 | - | C1H5g19817 | C2H5g16202 | LOC_Os05g02870 | Os05g0120000 | - | Detail |
| CX5g040974 | 5:931,889-934,003 | - | C1H5g25594 | C2H5g27318 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| CX5g037156 | 5:936,843-938,942 | + | C1H5g19817 | C2H5g16202 | LOC_Os05g02890 | Os05g0120200 | - | Detail |
| CX5g041155 | 5:949,588-950,259 | + | - | - | LOC_Os05g02900 | Os05g0120300 | - | Detail |
| CX5g037865 | 5:967,315-971,968 | + | C1H5g31585 | C2H5g09848 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| CX5g036874 | 5:974,401-974,631 | - | - | - | - | - | - | Detail |
| CX5g040092 | 5:975,887-977,471 | + | C1H5g20255 | C2H5g03610 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| CX5g038539 | 5:981,504-982,379 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g02980 | Os05g0120900 | - | Detail |
| CX5g038448 | 5:988,215-989,619 | + | C1H5g25679 | C2H5g24004 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| CX5g038251 | 5:998,051-1,001,269 | + | C1H5g01702 | C2H5g03745 | - | Os05g0121100 | - | Detail |
| CX5g038381 | 5:1,003,237-1,007,447 | - | C1H5g21915 | C2H5g13518 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| CX5g037956 | 5:1,008,739-1,013,675 | + | C1H5g23502 | C2H5g27724 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| CX5g038375 | 5:1,014,675-1,015,376 | - | C1H1g21238 | - | LOC_Os05g03030 | Os05g0121500 | - | Detail |
| CX5g038220 | 5:1,022,357-1,025,809 | - | C1H5g18884 | C2H5g29033 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g039403 | 5:1,030,505-1,030,669 | + | - | - | - | - | - | Detail |
| CX5g039140 | 5:1,042,559-1,042,717 | + | - | - | - | - | - | Detail |
| CX5g039481 | 5:1,056,023-1,060,794 | - | C1H5g22491 | C2H5g03539 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| CX5g038840 | 5:1,066,925-1,070,736 | + | C1H5g25689 | C2H5g07687 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| CX5g041093 | 5:1,071,490-1,072,860 | - | C1H5g18041 | C2H5g05750 | LOC_Os05g03070 | Os05g0121900 | - | Detail |