| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g09442 | 9:16,400,420-16,402,816 | - | C1H9g29051 | CX9g055341 | LOC_Os09g32610 | Os09g0502900 | - | Detail |
| C2H9g03067 | 9:16,407,616-16,408,962 | + | C1H9g27895 | CX9g055636 | LOC_Os09g32620 | Os09g0503000 | - | Detail |
| C2H9g26652 | 9:16,411,252-16,413,800 | + | C1H9g22567 | CX9g058014 | LOC_Os09g32640 | Os09g0503100 | - | Detail |
| C2H9g20718 | 9:16,414,863-16,419,722 | + | C1H9g12902 | CX9g055869 | LOC_Os09g32650 | Os09g0503400 | - | Detail |
| C2H9g18609 | 9:16,421,577-16,423,158 | - | C1H9g11041 | CX9g055215 | LOC_Os09g32660 | Os09g0503700 | - | Detail |
| C2H9g25649 | 9:16,431,637-16,434,336 | - | C1H9g11647 | CX9g055341 | LOC_Os09g32410 | Os09g0503700 | - | Detail |
| C2H9g28585 | 9:16,451,947-16,455,777 | + | C1H9g15461 | CX9g056666 | LOC_Os09g32680 | Os09g0504400 | OsCycC | Detail |
| C2H9g18502 | 9:16,456,999-16,459,212 | - | C1H9g24869 | CX9g055615 | LOC_Os09g32690 | Os09g0504700 | - | Detail |
| C2H9g07035 | 9:16,460,332-16,462,127 | + | C1H9g01645 | CX9g055065 | LOC_Os09g32700 | Os09g0504800 | - | Detail |
| C2H9g25198 | 9:16,462,746-16,465,789 | - | C1H9g24207 | CX9g057729 | LOC_Os09g32710 | Os09g0504900 | - | Detail |
| C2H9g10527 | 9:16,476,400-16,481,972 | - | C1H9g18162 | CX9g056102 | LOC_Os09g32740 | Os09g0505100 | OsLMP1 | Detail |
| C2H9g09607 | 9:16,489,666-16,493,600 | + | C1H9g22641 | CX9g056649 | LOC_Os09g32750 | Os09g0505200 | - | Detail |
| C2H9g21366 | 9:16,495,183-16,498,492 | - | C1H9g03482 | CX9g055713 | LOC_Os09g32760 | Os09g0505300 | - | Detail |
| C2H9g12699 | 9:16,502,384-16,505,020 | - | C1H9g24687 | CX9g056695 | LOC_Os09g32770 | Os09g0505400 | - | Detail |
| C2H9g11822 | 9:16,508,288-16,511,473 | + | C1H9g26041 | CX9g056682 | LOC_Os09g32800 | Os09g0505600 | - | Detail |
| C2H9g18360 | 9:16,512,741-16,516,792 | + | - | CX9g057981 | LOC_Os09g32810 | Os09g0505700 | - | Detail |
| C2H9g24671 | 9:16,517,783-16,523,355 | + | C1H9g21392 | CX9g056458 | LOC_Os09g32820 | Os09g0505800 | - | Detail |
| C2H9g08120 | 9:16,525,366-16,528,867 | + | C1H9g14148 | CX9g057123 | LOC_Os09g32830 | Os09g0505900 | - | Detail |
| C2H9g17089 | 9:16,529,292-16,533,858 | - | C1H9g17584 | CX9g056383 | LOC_Os09g32840 | Os09g0506000 | - | Detail |
| C2H9g19754 | 9:16,534,513-16,535,606 | - | C1H9g11480 | CX9g056383 | LOC_Os09g32850 | Os09g0506000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040523 | 5:917,514-922,736 | + | - | C2H5g16207 | - | - | - | Detail |
| CX5g038722 | 5:928,055-929,982 | - | C1H5g19817 | C2H5g16202 | LOC_Os05g02870 | Os05g0120000 | - | Detail |
| CX5g040974 | 5:931,889-934,003 | - | C1H5g25594 | C2H5g27318 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| CX5g037156 | 5:936,843-938,942 | + | C1H5g19817 | C2H5g16202 | LOC_Os05g02890 | Os05g0120200 | - | Detail |
| CX5g041155 | 5:949,588-950,259 | + | - | - | LOC_Os05g02900 | Os05g0120300 | - | Detail |
| CX5g037865 | 5:967,315-971,968 | + | C1H5g31585 | C2H5g09848 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| CX5g036874 | 5:974,401-974,631 | - | - | - | - | - | - | Detail |
| CX5g040092 | 5:975,887-977,471 | + | C1H5g20255 | C2H5g03610 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| CX5g038539 | 5:981,504-982,379 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g02980 | Os05g0120900 | - | Detail |
| CX5g038448 | 5:988,215-989,619 | + | C1H5g25679 | C2H5g24004 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| CX5g038251 | 5:998,051-1,001,269 | + | C1H5g01702 | C2H5g03745 | - | Os05g0121100 | - | Detail |
| CX5g038381 | 5:1,003,237-1,007,447 | - | C1H5g21915 | C2H5g13518 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| CX5g037956 | 5:1,008,739-1,013,675 | + | C1H5g23502 | C2H5g27724 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| CX5g038375 | 5:1,014,675-1,015,376 | - | C1H1g21238 | - | LOC_Os05g03030 | Os05g0121500 | - | Detail |
| CX5g038220 | 5:1,022,357-1,025,809 | - | C1H5g18884 | C2H5g29033 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g039403 | 5:1,030,505-1,030,669 | + | - | - | - | - | - | Detail |
| CX5g039140 | 5:1,042,559-1,042,717 | + | - | - | - | - | - | Detail |
| CX5g039481 | 5:1,056,023-1,060,794 | - | C1H5g22491 | C2H5g03539 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| CX5g038840 | 5:1,066,925-1,070,736 | + | C1H5g25689 | C2H5g07687 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| CX5g041093 | 5:1,071,490-1,072,860 | - | C1H5g18041 | C2H5g05750 | LOC_Os05g03070 | Os05g0121900 | - | Detail |