| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g01520 | 4:24,414,285-24,417,507 | + | C2H4g05524 | CX4g036555 | LOC_Os04g47320 | Os04g0561000 | - | Detail |
| C1H4g11046 | 4:24,419,372-24,420,162 | - | C2H4g24329 | CX4g033871 | LOC_Os04g47330 | Os04g0561200 | OsROP | Detail |
| C1H4g17483 | 4:24,425,547-24,429,715 | + | C2H4g08693 | CX4g034561 | LOC_Os04g47360 | Os04g0561500 | - | Detail |
| C1H4g22676 | 4:24,431,540-24,435,073 | + | C2H4g04530 | CX4g034510 | LOC_Os04g47370 | Os04g0561600 | - | Detail |
| C1H4g16662 | 4:24,434,744-24,439,326 | - | C2H4g06692 | CX4g035518 | LOC_Os04g47380 | Os04g0561700 | - | Detail |
| C1H4g25205 | 4:24,440,561-24,442,028 | - | C2H4g02963 | CX4g033152 | LOC_Os04g47390 | Os04g0561800 | - | Detail |
| C1H4g17277 | 4:24,446,851-24,447,263 | - | C2H4g29534 | CX4g032801 | LOC_Os04g47400 | Os04g0561900 | - | Detail |
| C1H4g22962 | 4:24,447,318-24,449,931 | - | C2H4g29534 | CX4g032801 | LOC_Os04g47400 | Os04g0561900 | - | Detail |
| C1H4g25981 | 4:24,450,921-24,456,439 | + | C2H4g11725 | CX4g034619 | LOC_Os04g47410 | Os04g0562000 | - | Detail |
| C1H4g01383 | 4:24,457,881-24,459,827 | - | C2H4g01488 | CX4g033511 | LOC_Os04g47420 | Os04g0562100 | OsLHT5 | Detail |
| C1H4g04777 | 4:24,471,281-24,472,643 | + | C2H4g15916 | - | LOC_Os04g47450 | Os04g0562500 | - | Detail |
| C1H4g29153 | 4:24,471,476-24,473,460 | - | - | CX4g034056 | - | Os04g0562650 | - | Detail |
| C1H4g07137 | 4:24,484,392-24,488,949 | + | C2H4g02352 | CX4g032344 | LOC_Os04g47480 | Os04g0562800 | - | Detail |
| C1H4g14768 | 4:24,490,651-24,494,856 | - | C2H4g30154 | CX4g031395 | LOC_Os04g47520 | Os04g0563000 | - | Detail |
| C1H4g27503 | 4:24,501,606-24,505,486 | - | C2H4g13189 | CX4g034508 | LOC_Os04g47530 | Os04g0563100 | - | Detail |
| C1H4g12075 | 4:24,505,618-24,507,841 | + | C2H4g09598 | CX4g032577 | LOC_Os04g47550 | Os04g0563300 | - | Detail |
| C1H4g30163 | 4:24,512,065-24,514,490 | - | C2H4g06274 | CX4g036609 | LOC_Os04g47580 | Os04g0563700 | - | Detail |
| C1H4g25027 | 4:24,517,017-24,533,586 | - | C2H4g20502 | CX4g036534 | LOC_Os04g47590 | Os04g0563801 | - | Detail |
| C1H4g07757 | 4:24,548,637-24,551,440 | - | C2H4g03895 | CX4g036655 | LOC_Os04g47620 | Os04g0563900 | - | Detail |
| C1H4g23508 | 4:24,558,289-24,560,442 | - | C2H4g00625 | CX4g036311 | LOC_Os04g47640 | Os04g0564000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040523 | 5:917,514-922,736 | + | - | C2H5g16207 | - | - | - | Detail |
| CX5g038722 | 5:928,055-929,982 | - | C1H5g19817 | C2H5g16202 | LOC_Os05g02870 | Os05g0120000 | - | Detail |
| CX5g040974 | 5:931,889-934,003 | - | C1H5g25594 | C2H5g27318 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| CX5g037156 | 5:936,843-938,942 | + | C1H5g19817 | C2H5g16202 | LOC_Os05g02890 | Os05g0120200 | - | Detail |
| CX5g041155 | 5:949,588-950,259 | + | - | - | LOC_Os05g02900 | Os05g0120300 | - | Detail |
| CX5g037865 | 5:967,315-971,968 | + | C1H5g31585 | C2H5g09848 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| CX5g036874 | 5:974,401-974,631 | - | - | - | - | - | - | Detail |
| CX5g040092 | 5:975,887-977,471 | + | C1H5g20255 | C2H5g03610 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| CX5g038539 | 5:981,504-982,379 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g02980 | Os05g0120900 | - | Detail |
| CX5g038448 | 5:988,215-989,619 | + | C1H5g25679 | C2H5g24004 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| CX5g038251 | 5:998,051-1,001,269 | + | C1H5g01702 | C2H5g03745 | - | Os05g0121100 | - | Detail |
| CX5g038381 | 5:1,003,237-1,007,447 | - | C1H5g21915 | C2H5g13518 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| CX5g037956 | 5:1,008,739-1,013,675 | + | C1H5g23502 | C2H5g27724 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| CX5g038375 | 5:1,014,675-1,015,376 | - | C1H1g21238 | - | LOC_Os05g03030 | Os05g0121500 | - | Detail |
| CX5g038220 | 5:1,022,357-1,025,809 | - | C1H5g18884 | C2H5g29033 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g039403 | 5:1,030,505-1,030,669 | + | - | - | - | - | - | Detail |
| CX5g039140 | 5:1,042,559-1,042,717 | + | - | - | - | - | - | Detail |
| CX5g039481 | 5:1,056,023-1,060,794 | - | C1H5g22491 | C2H5g03539 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| CX5g038840 | 5:1,066,925-1,070,736 | + | C1H5g25689 | C2H5g07687 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| CX5g041093 | 5:1,071,490-1,072,860 | - | C1H5g18041 | C2H5g05750 | LOC_Os05g03070 | Os05g0121900 | - | Detail |