| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g19500 | 4:18,883,147-18,884,170 | + | C2H4g09494 | CX4g034176 | - | - | - | Detail |
| C1H4g00410 | 4:18,894,184-18,895,475 | + | C2H4g06819 | CX4g036547 | LOC_Os04g35660 | Os04g0437000 | - | Detail |
| C1H4g05515 | 4:18,914,678-18,920,745 | - | C2H4g05233 | CX4g034057 | LOC_Os04g35700 | Os04g0437600 | - | Detail |
| C1H4g09818 | 4:18,951,621-18,953,743 | - | C2H4g05613 | CX4g034717 | LOC_Os04g35760 | Os04g0438300 | - | Detail |
| C1H4g19872 | 4:18,957,695-18,960,072 | - | C2H4g00301 | CX4g033240 | LOC_Os04g35780 | Os04g0438500 | - | Detail |
| C1H4g20672 | 4:18,966,991-18,970,391 | - | C2H4g06596 | CX4g035378 | LOC_Os04g35790 | Os04g0438600 | - | Detail |
| C1H4g03937 | 4:18,972,690-18,981,515 | - | C2H4g10039 | CX4g036235 | LOC_Os04g35800 | Os04g0438700 | - | Detail |
| C1H4g25308 | 4:18,999,670-19,005,452 | + | C2H4g02895 | CX4g035826 | LOC_Os04g35840 | Os04g0439100 | - | Detail |
| C1H4g23816 | 4:19,007,522-19,010,741 | + | C2H4g26325 | CX4g035975 | LOC_Os04g35860 | Os04g0439200 | - | Detail |
| C1H4g19312 | 4:19,011,721-19,012,883 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35864 | Os04g0439300 | - | Detail |
| C1H4g18934 | 4:19,013,356-19,016,908 | - | C2H4g30244 | CX4g034259 | LOC_Os04g35880 | Os04g0439400 | - | Detail |
| C1H4g04660 | 4:19,036,815-19,042,875 | - | C2H4g26224 | CX4g034675 | LOC_Os04g35900 | Os04g0439900 | - | Detail |
| C1H4g14055 | 4:19,044,168-19,046,299 | - | C2H4g24074 | CX4g032186 | LOC_Os04g35910 | Os04g0440000 | - | Detail |
| C1H4g11650 | 4:19,047,100-19,054,833 | - | C2H4g23223 | CX4g035576 | LOC_Os04g35920 | Os04g0440100 | - | Detail |
| C1H4g19673 | 4:19,063,298-19,064,663 | - | C2H4g25260 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g27240 | 4:19,065,863-19,066,443 | - | - | - | - | - | - | Detail |
| C1H4g00512 | 4:19,070,115-19,072,586 | - | C2H4g14486 | CX4g032500 | LOC_Os04g35970 | Os04g0440400 | - | Detail |
| C1H4g26868 | 4:19,076,827-19,078,846 | - | C2H4g19471 | CX4g032500 | LOC_Os04g35970 | Os04g0440300 | - | Detail |
| C1H4g06540 | 4:19,082,502-19,084,567 | - | C2H4g00509 | CX4g032500 | LOC_Os04g35940 | Os04g0440300 | - | Detail |
| C1H4g31755 | 4:19,088,245-19,090,198 | - | C2H4g22564 | CX4g032500 | LOC_Os04g35990 | Os04g0440300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g040523 | 5:917,514-922,736 | + | - | C2H5g16207 | - | - | - | Detail |
| CX5g038722 | 5:928,055-929,982 | - | C1H5g19817 | C2H5g16202 | LOC_Os05g02870 | Os05g0120000 | - | Detail |
| CX5g040974 | 5:931,889-934,003 | - | C1H5g25594 | C2H5g27318 | LOC_Os05g02880 | Os05g0120100 | - | Detail |
| CX5g037156 | 5:936,843-938,942 | + | C1H5g19817 | C2H5g16202 | LOC_Os05g02890 | Os05g0120200 | - | Detail |
| CX5g041155 | 5:949,588-950,259 | + | - | - | LOC_Os05g02900 | Os05g0120300 | - | Detail |
| CX5g037865 | 5:967,315-971,968 | + | C1H5g31585 | C2H5g09848 | LOC_Os05g02940 | Os05g0120700 | - | Detail |
| CX5g036874 | 5:974,401-974,631 | - | - | - | - | - | - | Detail |
| CX5g040092 | 5:975,887-977,471 | + | C1H5g20255 | C2H5g03610 | LOC_Os05g02970 | Os05g0120800 | - | Detail |
| CX5g038539 | 5:981,504-982,379 | - | C1H5g10148 | C2H5g15789 | LOC_Os05g02980 | Os05g0120900 | - | Detail |
| CX5g038448 | 5:988,215-989,619 | + | C1H5g25679 | C2H5g24004 | LOC_Os05g02990 | Os05g0121000 | - | Detail |
| CX5g038251 | 5:998,051-1,001,269 | + | C1H5g01702 | C2H5g03745 | - | Os05g0121100 | - | Detail |
| CX5g038381 | 5:1,003,237-1,007,447 | - | C1H5g21915 | C2H5g13518 | LOC_Os05g03000 | Os05g0121200 | - | Detail |
| CX5g037956 | 5:1,008,739-1,013,675 | + | C1H5g23502 | C2H5g27724 | LOC_Os05g03020 | Os05g0121400 | - | Detail |
| CX5g038375 | 5:1,014,675-1,015,376 | - | C1H1g21238 | - | LOC_Os05g03030 | Os05g0121500 | - | Detail |
| CX5g038220 | 5:1,022,357-1,025,809 | - | C1H5g18884 | C2H5g29033 | LOC_Os05g03040 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| CX5g039403 | 5:1,030,505-1,030,669 | + | - | - | - | - | - | Detail |
| CX5g039140 | 5:1,042,559-1,042,717 | + | - | - | - | - | - | Detail |
| CX5g039481 | 5:1,056,023-1,060,794 | - | C1H5g22491 | C2H5g03539 | LOC_Os05g03050 | Os05g0121700 | - | Detail |
| CX5g038840 | 5:1,066,925-1,070,736 | + | C1H5g25689 | C2H5g07687 | LOC_Os05g03060 | Os05g0121800 | - | Detail |
| CX5g041093 | 5:1,071,490-1,072,860 | - | C1H5g18041 | C2H5g05750 | LOC_Os05g03070 | Os05g0121900 | - | Detail |