| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g10005 | 2:28,207,592-28,213,840 | + | C2H2g04852 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| C1H2g07594 | 2:28,214,316-28,214,573 | - | C2H2g22765 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C1H2g14249 | 2:28,227,982-28,228,206 | + | C2H2g21919 | - | LOC_Os02g50450 | Os02g0737950 | - | Detail |
| C1H2g30478 | 2:28,228,722-28,229,055 | + | - | - | - | Os02g0737950 | - | Detail |
| C1H2g00500 | 2:28,261,361-28,267,274 | + | C2H2g16308 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C1H2g09387 | 2:28,276,045-28,279,625 | + | C2H2g12754 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C1H2g28406 | 2:28,287,671-28,297,491 | - | C2H2g25440 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C1H2g30401 | 2:28,297,507-28,297,704 | - | - | CX2g022539 | - | - | - | Detail |
| C1H2g06055 | 2:28,299,126-28,308,398 | + | C2H2g10338 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C1H2g22155 | 2:28,308,325-28,312,785 | - | C2H2g19070 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C1H2g19740 | 2:28,332,807-28,336,612 | - | C2H2g13279 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C1H2g02446 | 2:28,338,313-28,341,142 | - | C2H2g20599 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C1H2g01602 | 2:28,343,991-28,348,147 | - | C2H2g22496 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C1H2g14498 | 2:28,363,242-28,369,337 | - | C2H2g07910 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C1H2g26149 | 2:28,370,112-28,371,544 | - | C2H2g25866 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C1H2g27425 | 2:28,376,019-28,377,561 | + | C2H2g26692 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C1H2g04140 | 2:28,382,759-28,385,516 | - | C2H2g23006 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C1H2g20437 | 2:28,398,757-28,402,464 | + | C2H2g20295 | CX2g020505 | LOC_Os02g50760 | Os02g0741100 | - | Detail |
| C1H2g04090 | 2:28,407,528-28,412,353 | + | C2H2g20379 | CX2g020607 | LOC_Os02g50780 | Os02g0741300 | - | Detail |
| C1H2g03541 | 2:28,412,827-28,437,570 | - | C2H2g26992 | CX2g021407 | LOC_Os02g50790 | Os02g0741500 | OsTPR | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX5g037561 | 5:35,422-36,254 | - | C1H5g12346 | C2H5g21166 | - | - | - | Detail |
| CX5g039036 | 5:37,161-40,241 | + | C1H5g00652 | C2H5g29890 | LOC_Os05g01010 | Os05g0100100 | - | Detail |
| CX5g040413 | 5:41,941-49,305 | - | C1H5g10737 | C2H5g01522 | LOC_Os05g01020 | Os05g0100500 | - | Detail |
| CX5g037647 | 5:61,339-65,634 | + | C1H5g05944 | C2H5g21354 | LOC_Os05g01030 | Os05g0100600 | - | Detail |
| CX5g037545 | 5:66,563-69,940 | - | C1H5g06950 | C2H5g14491 | LOC_Os05g01040 | Os05g0218400 | Z15 | Detail |
| CX5g037967 | 5:69,607-70,035 | + | - | - | - | Os05g0100750 | - | Detail |
| CX5g036823 | 5:71,572-72,855 | - | C1H5g22050 | C2H5g06043 | LOC_Os05g01050 | Os05g0100800 | - | Detail |
| CX5g038924 | 5:74,339-81,510 | - | C1H5g13271 | C2H5g28102 | LOC_Os05g01060 | Os05g0100900 | - | Detail |
| CX5g040083 | 5:87,692-91,391 | + | C1H5g18989 | C2H5g25832 | LOC_Os05g01090 | Os05g0101200 | OsPEX14, OsPex14p | Detail |
| CX5g039249 | 5:91,984-92,733 | - | C1H5g01427 | C2H5g05651 | LOC_Os05g01100 | Os05g0101300 | - | Detail |
| CX5g037704 | 5:93,590-95,630 | - | C1H5g30080 | C2H5g14269 | LOC_Os05g01110 | Os05g0101400 | - | Detail |
| CX5g038525 | 5:97,558-99,657 | - | C1H5g01547 | C2H5g11548 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| CX5g037568 | 5:102,253-102,462 | - | - | - | - | - | - | Detail |
| CX5g037560 | 5:106,142-107,251 | - | - | - | LOC_Os05g01140 | Os05g0102000 | OsJMT1 | Detail |
| CX5g039457 | 5:111,824-112,158 | - | - | - | LOC_Os07g13850 | - | - | Detail |
| CX5g040553 | 5:119,457-122,736 | + | C1H5g21429 | C2H5g11343 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| CX5g038962 | 5:123,965-124,744 | + | C1H5g12210 | C2H5g29002 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| CX5g039033 | 5:125,711-126,746 | - | C1H5g24021 | C2H5g25831 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| CX5g037244 | 5:130,857-135,316 | + | C1H5g11428 | C2H5g09707 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| CX5g038484 | 5:136,522-142,837 | - | C1H5g05413 | C2H5g01721 | LOC_Os05g01240 | Os05g0102800 | - | Detail |