| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g23514 | 2:5,188,240-5,188,770 | - | C2H2g02539 | CX2g019330 | LOC_Os02g10730 | Os02g0201300 | - | Detail |
| C1H2g23712 | 2:5,204,367-5,207,578 | - | C2H2g22913 | CX2g020008 | LOC_Os02g10740 | Os02g0201500 | - | Detail |
| C1H2g24067 | 2:5,222,676-5,226,523 | + | C2H2g21450 | CX2g021409 | LOC_Os02g10760 | Os02g0202000 | ERF3, Os02ERF, OsSHN1, OsWR1, WR1, OsERF#003, OsERF003, OsERF3, AP2/EREBP#012, AP2/EREBP12 | Detail |
| C1H2g20496 | 2:5,228,279-5,231,380 | - | C2H2g30620 | CX2g019796 | LOC_Os02g10770 | Os02g0201900 | - | Detail |
| C1H2g04540 | 2:5,238,875-5,242,671 | + | C2H2g13782 | CX2g022152 | LOC_Os02g10780 | Os02g0202200 | OsSPX2, SPX2 | Detail |
| C1H2g00291 | 2:5,242,962-5,272,034 | - | C2H2g29179 | CX2g020057 | LOC_Os02g10794 | Os02g0202300 | - | Detail |
| C1H2g24396 | 2:5,276,796-5,278,565 | + | C2H2g11742 | CX2g021980 | LOC_Os02g10800 | Os02g0202400 | BT1-1, OsBT1-1, OsEnS-29 | Detail |
| C1H2g08933 | 2:5,279,378-5,281,076 | - | C2H2g19152 | CX2g024114 | LOC_Os02g10810 | Os02g0202500 | - | Detail |
| C1H2g31316 | 2:5,288,596-5,290,118 | - | - | CX2g019700 | - | - | - | Detail |
| C1H2g01124 | 2:5,293,016-5,295,891 | - | C2H2g03245 | CX2g021583 | LOC_Os02g10820 | Os02g0202600 | - | Detail |
| C1H2g31302 | 2:5,296,757-5,301,890 | - | C2H2g06319 | CX2g022814 | LOC_Os02g10830 | Os02g0202700 | OsSAT1;2 | Detail |
| C1H2g29373 | 2:5,303,345-5,306,479 | - | C2H2g07043 | CX2g019052 | LOC_Os02g10850 | Os02g0202900 | - | Detail |
| C1H2g02349 | 2:5,306,902-5,310,715 | - | C2H2g24991 | CX2g019052 | LOC_Os02g10860 | Os02g0203000 | OsHY5L1, OsbZIP18 | Detail |
| C1H2g01017 | 2:5,335,155-5,336,615 | + | C2H2g26118 | CX2g020727 | LOC_Os02g10880 | Os02g0203300 | - | Detail |
| C1H2g00292 | 2:5,338,551-5,339,404 | - | - | - | - | - | - | Detail |
| C1H2g24176 | 2:5,344,159-5,348,521 | - | C2H2g10759 | CX2g020524 | LOC_Os02g10900 | Os02g0203500 | RLS1 | Detail |
| C1H2g09288 | 2:5,351,796-5,353,023 | - | C2H2g18458 | CX2g021071 | LOC_Os02g10920 | Os02g0203700 | SRZ1 | Detail |
| C1H2g31487 | 2:5,365,542-5,366,270 | - | - | CX2g019443 | LOC_Os02g10940 | Os02g0204000 | - | Detail |
| C1H2g01355 | 2:5,367,074-5,375,206 | + | C2H2g20592 | CX2g021033 | LOC_Os02g10970 | Os02g0204300 | - | Detail |
| C1H2g02729 | 2:5,376,552-5,379,706 | + | C2H2g16217 | CX2g020882 | LOC_Os02g10990 | Os02g0204400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g032372 | 4:30,227,296-30,228,027 | + | - | C2H4g29352 | LOC_Os04g58820 | Os04g0685000 | - | Detail |
| CX4g035667 | 4:30,230,500-30,232,899 | - | C1H4g14195 | C2H4g17883 | LOC_Os04g58830 | Os04g0685100 | - | Detail |
| CX4g035231 | 4:30,235,181-30,236,662 | + | - | C2H4g29963 | LOC_Os04g58840 | Os04g0685200 | - | Detail |
| CX4g035928 | 4:30,240,902-30,241,519 | - | C1H4g00056 | C2H4g08586 | LOC_Os04g58850 | Os04g0685300 | OsHin1 | Detail |
| CX4g035805 | 4:30,246,164-30,246,826 | - | - | C2H4g17212 | LOC_Os04g58860 | Os04g0685400 | - | Detail |
| CX4g032434 | 4:30,256,001-30,256,534 | + | - | C2H10g28572 | LOC_Os12g04490 | - | - | Detail |
| CX4g034074 | 4:30,259,247-30,264,754 | - | C1H4g12841 | C2H4g09863 | LOC_Os04g58880 | Os04g0685600 | OsEXO70A1, RLS2 | Detail |
| CX4g035539 | 4:30,268,595-30,269,440 | - | - | C2H4g05485 | LOC_Os04g58890 | Os04g0685700 | - | Detail |
| CX4g035298 | 4:30,271,798-30,274,550 | + | C1H4g24643 | C2H4g05284 | LOC_Os04g58900 | Os04g0685800 | - | Detail |
| CX4g034645 | 4:30,274,923-30,275,093 | - | - | - | - | - | - | Detail |
| CX4g033134 | 4:30,277,478-30,280,776 | - | C1H4g30748 | C2H4g20145 | LOC_Os04g58910 | Os04g0685900 | - | Detail |
| CX4g032789 | 4:30,289,937-30,291,235 | + | - | - | - | - | - | Detail |
| CX4g036614 | 4:30,298,216-30,298,488 | - | C1H4g08597 | C2H4g24662 | LOC_Os04g58940 | Os04g0686100 | - | Detail |
| CX4g033434 | 4:30,302,898-30,309,554 | - | C1H4g06869 | C2H4g20786 | LOC_Os04g58960 | Os04g0686200 | OsRLR4 | Detail |
| CX4g033160 | 4:30,319,079-30,320,832 | - | C1H4g27993 | C2H4g06556 | LOC_Os04g58980 | Os04g0686300 | - | Detail |
| CX4g034151 | 4:30,321,602-30,325,521 | - | C1H4g20559 | C2H4g09974 | LOC_Os04g58990 | Os04g0686500 | - | Detail |
| CX4g032982 | 4:30,326,481-30,332,353 | - | C1H4g22211 | C2H4g02812 | LOC_Os04g59000 | Os04g0686650 | - | Detail |
| CX4g032332 | 4:30,341,827-30,343,068 | - | - | C2H4g14334 | LOC_Os04g59010 | Os04g0686700 | - | Detail |
| CX4g035004 | 4:30,348,016-30,348,630 | + | - | C2H4g23629 | LOC_Os04g59020 | Os04g0686800 | OsVTL5 | Detail |
| CX4g033455 | 4:30,354,401-30,357,831 | - | C1H4g16557 | C2H4g05730 | LOC_Os04g59040 | Os04g0687100 | - | Detail |