| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18501 | 2:19,164,380-19,165,406 | - | C1H2g27793 | CX2g022789 | LOC_Os02g33790 | - | - | Detail |
| C2H2g01260 | 2:19,165,423-19,165,857 | - | C1H2g08622 | - | - | - | - | Detail |
| C2H2g07033 | 2:19,172,363-19,172,898 | - | C1H2g21560 | CX2g019174 | LOC_Os02g33820 | Os02g0543000 | - | Detail |
| C2H2g22437 | 2:19,175,500-19,178,856 | - | C1H2g07478 | CX2g020648 | LOC_Os02g33830 | Os02g0543100 | - | Detail |
| C2H2g26343 | 2:19,188,625-19,192,497 | + | C1H2g21330 | CX2g023537 | LOC_Os02g33860 | Os02g0543400 | SGW5 | Detail |
| C2H2g00010 | 2:19,210,530-19,213,037 | - | C1H2g10313 | CX2g020736 | LOC_Os02g33890 | Os02g0297200 | - | Detail |
| C2H2g15474 | 2:19,270,010-19,275,300 | - | - | - | - | - | - | Detail |
| C2H2g13315 | 2:19,313,391-19,315,782 | - | C1H11g14205 | CX11g014480 | LOC_Os11g43404 | - | - | Detail |
| C2H2g17047 | 2:19,317,086-19,317,352 | + | C1H1g25728 | - | - | Os03g0578300 | - | Detail |
| C2H2g01626 | 2:19,385,469-19,407,701 | + | C1H2g27639 | CX2g024825 | LOC_Os03g64290 | Os02g0545000 | - | Detail |
| C2H2g18126 | 2:19,448,579-19,448,917 | + | C1H2g31615 | CX2g023067 | - | - | - | Detail |
| C2H2g08974 | 2:19,452,277-19,453,420 | + | - | - | - | Os02g0546400 | - | Detail |
| C2H2g03353 | 2:19,454,809-19,455,564 | - | C1H2g27118 | CX2g021266 | LOC_Os02g34260 | Os02g0546600 | - | Detail |
| C2H2g28913 | 2:19,483,392-19,485,886 | + | C1H2g07807 | CX2g021833 | LOC_Os02g34320 | - | - | Detail |
| C2H2g23048 | 2:19,496,791-19,499,312 | + | C1H2g25374 | CX2g022612 | LOC_Os02g34370 | Os02g0548100 | - | Detail |
| C2H2g01870 | 2:19,500,390-19,501,638 | + | C1H2g22824 | CX2g024786 | - | - | - | Detail |
| C2H2g11085 | 2:19,550,517-19,554,041 | + | C1H2g19067 | CX2g022202 | LOC_Os02g34430 | Os02g0549200 | - | Detail |
| C2H2g12630 | 2:19,560,433-19,562,262 | - | C1H2g22829 | - | - | Os02g0549401 | - | Detail |
| C2H2g30100 | 2:19,567,302-19,569,544 | + | C1H2g16065 | CX2g020503 | LOC_Os02g34460 | Os02g0549600 | - | Detail |
| C2H2g10553 | 2:19,579,625-19,586,051 | + | C1H2g11806 | CX2g019946 | LOC_Os02g34490 | Os02g0549900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035113 | 4:30,100,707-30,104,388 | + | C1H4g28533 | C2H4g17181 | LOC_Os04g58600 | Os04g0682500 | - | Detail |
| CX4g034300 | 4:30,108,573-30,116,773 | - | C1H4g29653 | C2H4g03946 | LOC_Os04g58620 | Os04g0682800 | - | Detail |
| CX4g036068 | 4:30,118,203-30,125,400 | - | C1H4g29653 | C2H4g03946 | LOC_Os04g58630 | Os04g0682900 | OsMSH3 | Detail |
| CX4g036644 | 4:30,126,152-30,129,492 | - | C1H4g01136 | C2H4g28695 | LOC_Os04g58640 | Os04g0683100 | - | Detail |
| CX4g035462 | 4:30,137,831-30,138,142 | + | - | - | - | - | - | Detail |
| CX4g033383 | 4:30,138,983-30,141,655 | + | C1H4g02161 | C2H4g18113 | LOC_Os04g58690 | Os04g0683500 | - | Detail |
| CX4g035511 | 4:30,149,227-30,154,271 | + | C1H4g12491 | C2H4g00628 | LOC_Os04g58700 | Os04g0683600 | - | Detail |
| CX4g034879 | 4:30,156,260-30,157,902 | - | C1H4g05282 | C2H4g20996 | LOC_Os04g58710 | Os04g0683700 | OsAAE3 | Detail |
| CX4g033496 | 4:30,162,771-30,168,139 | + | C1H4g17079 | C2H4g00697 | LOC_Os04g58720 | Os04g0683800 | OsFTIP6 | Detail |
| CX4g032610 | 4:30,168,536-30,170,657 | - | C1H4g07968 | C2H4g01840 | LOC_Os04g58730 | Os04g0683900 | - | Detail |
| CX4g032783 | 4:30,175,244-30,175,414 | - | - | - | LOC_Os04g58734 | Os04g0684100 | - | Detail |
| CX4g031746 | 4:30,176,885-30,177,274 | - | - | - | - | - | - | Detail |
| CX4g033459 | 4:30,187,458-30,193,121 | + | C1H4g20128 | C2H4g26858 | LOC_Os04g58750 | Os04g0684200 | OsBSK3 | Detail |
| CX4g035706 | 4:30,193,552-30,193,992 | - | - | - | - | - | - | Detail |
| CX4g033405 | 4:30,194,994-30,195,847 | + | C1H4g02282 | C2H4g01802 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| CX4g031834 | 4:30,199,007-30,206,430 | + | C1H4g18219 | C2H4g02516 | LOC_Os04g58780 | Os04g0684500 | - | Detail |
| CX4g033329 | 4:30,210,632-30,210,877 | + | - | C2H4g13202 | LOC_Os04g58790 | Os04g0684600 | - | Detail |
| CX4g033643 | 4:30,214,071-30,215,633 | + | C1H4g26669 | C2H4g22761 | LOC_Os04g58800 | Os04g0684800 | - | Detail |
| CX4g036097 | 4:30,217,818-30,217,973 | + | - | - | - | - | - | Detail |
| CX4g034684 | 4:30,218,996-30,219,898 | + | - | C2H4g01080 | LOC_Os04g58810 | Os04g0684900 | OsCAF1B, OsCAF1B(L), OsCAF1-5 | Detail |