| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g12172 | 5:17,232,298-17,233,225 | - | C2H5g29672 | CX5g040557 | - | Os05g0194900 | - | Detail |
| C1H5g17005 | 5:17,241,782-17,245,598 | - | C2H5g16540 | CX5g040362 | LOC_Os05g35440 | Os05g0429000 | - | Detail |
| C1H5g22440 | 5:17,255,009-17,257,864 | - | C2H5g17304 | CX5g038601 | LOC_Os05g35460 | Os05g0429400 | OsSec14-15 | Detail |
| C1H5g14294 | 5:17,268,063-17,269,541 | - | C2H5g21445 | CX5g040206 | LOC_Os05g35470 | Os05g0429500 | - | Detail |
| C1H5g15484 | 5:17,271,189-17,273,603 | - | C2H5g17599 | CX5g040258 | LOC_Os05g35480 | Os05g0429700 | - | Detail |
| C1H5g07206 | 5:17,289,709-17,292,065 | - | C2H5g19149 | CX5g040733 | LOC_Os05g35500 | Os05g0429900 | Os2R_MYB55 | Detail |
| C1H5g31878 | 5:17,311,886-17,314,724 | + | C2H5g03708 | CX5g040159 | LOC_Os05g35520 | Os05g0430200 | WSL8, OsdNK1 | Detail |
| C1H5g29612 | 5:17,318,247-17,325,158 | + | C2H5g15157 | CX5g037930 | LOC_Os05g35530 | Os05g0430300 | - | Detail |
| C1H5g14215 | 5:17,325,543-17,328,315 | - | C2H5g00279 | CX5g037098 | LOC_Os05g35540 | Os05g0430400 | - | Detail |
| C1H5g14117 | 5:17,330,288-17,333,531 | - | C2H5g17573 | CX5g037181 | LOC_Os05g35570 | Os05g0430700 | - | Detail |
| C1H5g07334 | 5:17,335,763-17,337,382 | + | C2H5g09764 | CX5g040469 | LOC_Os05g35580 | Os05g0430800 | - | Detail |
| C1H5g03259 | 5:17,338,673-17,342,922 | - | C2H5g18718 | CX5g039914 | LOC_Os05g35594 | Os05g0430900 | - | Detail |
| C1H5g09633 | 5:17,345,840-17,353,788 | - | C2H5g16055 | CX5g038608 | LOC_Os05g35650 | Os05g0431700 | - | Detail |
| C1H5g09210 | 5:17,377,197-17,378,321 | + | C2H5g06148 | CX5g039496 | LOC_Os05g35690 | Os05g0432200 | - | Detail |
| C1H5g28604 | 5:17,384,147-17,387,251 | + | C2H5g11935 | CX5g040751 | LOC_Os05g35710 | Os05g0432400 | - | Detail |
| C1H5g12630 | 5:17,388,087-17,389,554 | + | C2H5g09659 | CX5g040765 | LOC_Os05g35720 | Os05g0432500 | - | Detail |
| C1H5g08283 | 5:17,390,038-17,396,590 | - | C2H5g06762 | CX5g038931 | LOC_Os05g35730 | Os05g0432600 | - | Detail |
| C1H5g28778 | 5:17,397,003-17,399,252 | - | C2H5g05683 | CX5g039477 | LOC_Os05g35740 | Os05g0432700 | - | Detail |
| C1H5g16916 | 5:17,402,585-17,405,520 | - | C2H5g04377 | CX5g037987 | LOC_Os05g35770 | Os05g0433100 | - | Detail |
| C1H5g16667 | 5:17,409,811-17,410,626 | + | C2H5g12046 | - | LOC_Os05g35800 | Os05g0435100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035113 | 4:30,100,707-30,104,388 | + | C1H4g28533 | C2H4g17181 | LOC_Os04g58600 | Os04g0682500 | - | Detail |
| CX4g034300 | 4:30,108,573-30,116,773 | - | C1H4g29653 | C2H4g03946 | LOC_Os04g58620 | Os04g0682800 | - | Detail |
| CX4g036068 | 4:30,118,203-30,125,400 | - | C1H4g29653 | C2H4g03946 | LOC_Os04g58630 | Os04g0682900 | OsMSH3 | Detail |
| CX4g036644 | 4:30,126,152-30,129,492 | - | C1H4g01136 | C2H4g28695 | LOC_Os04g58640 | Os04g0683100 | - | Detail |
| CX4g035462 | 4:30,137,831-30,138,142 | + | - | - | - | - | - | Detail |
| CX4g033383 | 4:30,138,983-30,141,655 | + | C1H4g02161 | C2H4g18113 | LOC_Os04g58690 | Os04g0683500 | - | Detail |
| CX4g035511 | 4:30,149,227-30,154,271 | + | C1H4g12491 | C2H4g00628 | LOC_Os04g58700 | Os04g0683600 | - | Detail |
| CX4g034879 | 4:30,156,260-30,157,902 | - | C1H4g05282 | C2H4g20996 | LOC_Os04g58710 | Os04g0683700 | OsAAE3 | Detail |
| CX4g033496 | 4:30,162,771-30,168,139 | + | C1H4g17079 | C2H4g00697 | LOC_Os04g58720 | Os04g0683800 | OsFTIP6 | Detail |
| CX4g032610 | 4:30,168,536-30,170,657 | - | C1H4g07968 | C2H4g01840 | LOC_Os04g58730 | Os04g0683900 | - | Detail |
| CX4g032783 | 4:30,175,244-30,175,414 | - | - | - | LOC_Os04g58734 | Os04g0684100 | - | Detail |
| CX4g031746 | 4:30,176,885-30,177,274 | - | - | - | - | - | - | Detail |
| CX4g033459 | 4:30,187,458-30,193,121 | + | C1H4g20128 | C2H4g26858 | LOC_Os04g58750 | Os04g0684200 | OsBSK3 | Detail |
| CX4g035706 | 4:30,193,552-30,193,992 | - | - | - | - | - | - | Detail |
| CX4g033405 | 4:30,194,994-30,195,847 | + | C1H4g02282 | C2H4g01802 | LOC_Os04g58760 | Os04g0684300 | OsCASP1 | Detail |
| CX4g031834 | 4:30,199,007-30,206,430 | + | C1H4g18219 | C2H4g02516 | LOC_Os04g58780 | Os04g0684500 | - | Detail |
| CX4g033329 | 4:30,210,632-30,210,877 | + | - | C2H4g13202 | LOC_Os04g58790 | Os04g0684600 | - | Detail |
| CX4g033643 | 4:30,214,071-30,215,633 | + | C1H4g26669 | C2H4g22761 | LOC_Os04g58800 | Os04g0684800 | - | Detail |
| CX4g036097 | 4:30,217,818-30,217,973 | + | - | - | - | - | - | Detail |
| CX4g034684 | 4:30,218,996-30,219,898 | + | - | C2H4g01080 | LOC_Os04g58810 | Os04g0684900 | OsCAF1B, OsCAF1B(L), OsCAF1-5 | Detail |