| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06538 | 2:24,858,158-24,860,369 | - | C1H2g30325 | - | LOC_Os02g44200 | Os02g0660800 | - | Detail |
| C2H2g11376 | 2:24,866,695-24,868,579 | - | C1H2g20977 | CX2g023483 | LOC_Os02g44220 | Os02g0661000 | - | Detail |
| C2H2g24399 | 2:24,869,774-24,871,887 | - | C1H2g04631 | CX2g021647 | LOC_Os02g44230 | Os02g0661100 | - | Detail |
| C2H2g19128 | 2:24,881,492-24,882,190 | - | C1H2g25412 | CX2g022676 | LOC_Os02g44250 | Os02g0661300 | OsINP1 | Detail |
| C2H2g21204 | 2:24,883,658-24,884,645 | - | C1H2g21912 | CX2g023571 | LOC_Os02g44260 | Os02g0661400 | - | Detail |
| C2H2g30070 | 2:24,887,869-24,890,673 | + | C1H2g22461 | CX2g019731 | - | - | - | Detail |
| C2H2g04950 | 2:24,893,544-24,894,458 | - | - | CX2g022635 | LOC_Os02g44280 | Os02g0661600 | - | Detail |
| C2H2g17837 | 2:24,902,059-24,902,676 | + | - | CX2g020697 | LOC_Os02g44290 | Os02g0661800 | - | Detail |
| C2H2g27433 | 2:24,904,371-24,906,912 | + | C1H2g15114 | CX2g019044 | LOC_Os02g44300 | Os02g0661900 | - | Detail |
| C2H2g22018 | 2:24,909,353-24,909,754 | + | - | CX2g020879 | LOC_Os02g44310 | Os02g0662000 | RCc3 | Detail |
| C2H2g14990 | 2:24,922,058-24,922,444 | + | - | CX2g019337 | LOC_Os02g44320 | Os02g0662100 | - | Detail |
| C2H2g04017 | 2:24,927,035-24,929,671 | + | C1H2g19773 | CX2g020576 | LOC_Os02g44330 | Os02g0662200 | OsGEF3 | Detail |
| C2H2g28023 | 2:24,931,752-24,932,241 | - | C1H2g15266 | CX2g023295 | LOC_Os02g44340 | Os02g0662300 | - | Detail |
| C2H2g19421 | 2:24,943,577-24,945,709 | + | C1H2g05666 | CX2g020332 | LOC_Os02g44360 | Os02g0662700 | - | Detail |
| C2H2g14821 | 2:24,951,770-24,953,923 | + | C1H2g06339 | CX2g024062 | LOC_Os02g44370 | Os02g0663100 | OsHAM2 | Detail |
| C2H2g21975 | 2:24,966,909-24,986,162 | - | C1H2g09242 | CX2g024718 | LOC_Os02g44380 | Os02g0663300 | - | Detail |
| C2H2g15214 | 2:24,990,676-24,992,244 | - | C1H2g16152 | CX2g024015 | LOC_Os02g44470 | Os02g0663800 | OsADF1 | Detail |
| C2H2g17711 | 2:24,992,920-24,994,923 | - | C1H2g26889 | CX2g023576 | LOC_Os02g44480 | Os02g0106300 | - | Detail |
| C2H2g04975 | 2:24,995,124-24,997,794 | - | C1H2g29993 | CX2g024801 | LOC_Os02g44490 | Os02g0663900 | - | Detail |
| C2H2g10873 | 2:25,001,718-25,004,064 | + | C1H2g17275 | CX2g024273 | LOC_Os02g44500 | Os02g0664000 | OsGPX3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034946 | 4:29,544,789-29,548,294 | - | C1H4g10516 | C2H4g09887 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| CX4g034217 | 4:29,559,319-29,562,000 | - | C1H4g18642 | C2H4g11022 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| CX4g034187 | 4:29,563,974-29,567,346 | - | C1H4g10863 | C2H4g26599 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| CX4g036532 | 4:29,570,099-29,576,184 | - | C1H4g29876 | C2H4g28020 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| CX4g032181 | 4:29,591,207-29,594,245 | - | C1H4g03758 | C2H4g22256 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| CX4g031927 | 4:29,606,374-29,610,757 | - | C1H4g28972 | C2H4g16737 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| CX4g031948 | 4:29,613,998-29,617,200 | - | C1H4g18744 | C2H4g14699 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| CX4g034422 | 4:29,624,116-29,629,994 | - | C1H4g12099 | C2H4g18413 | LOC_Os04g57670 | Os04g0672700 | - | Detail |
| CX4g031387 | 4:29,631,826-29,634,821 | + | C1H4g02898 | C2H4g13935 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| CX4g034255 | 4:29,636,164-29,638,564 | + | C1H4g21333 | C2H4g25125 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| CX4g032895 | 4:29,640,955-29,645,013 | - | C1H4g29753 | C2H4g28032 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| CX4g036002 | 4:29,668,085-29,668,554 | + | C1H4g17441 | C2H4g17256 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| CX4g033276 | 4:29,676,526-29,679,750 | - | C1H4g06545 | C2H4g16666 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| CX4g032931 | 4:29,682,415-29,683,042 | - | C1H4g12522 | C2H4g21541 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| CX4g035487 | 4:29,684,895-29,685,598 | - | C1H6g31651 | - | - | - | - | Detail |
| CX4g036442 | 4:29,687,627-29,688,619 | + | - | - | - | - | - | Detail |
| CX4g033668 | 4:29,696,393-29,699,335 | - | C1H4g25879 | C2H4g22422 | LOC_Os04g57780 | Os04g0674100 | - | Detail |
| CX4g033580 | 4:29,704,933-29,706,167 | + | C1H4g19205 | C2H4g06265 | LOC_Os04g57790 | Os04g0674200 | - | Detail |
| CX4g034130 | 4:29,707,137-29,710,871 | - | C1H4g22285 | C2H4g15166 | LOC_Os04g57800 | Os04g0674300 | - | Detail |
| CX4g032486 | 4:29,714,463-29,716,437 | + | C1H4g13095 | C2H4g23831 | LOC_Os04g57810 | Os04g0674400 | OsDRE2a | Detail |