| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g17621 | 7:1,317,257-1,318,202 | + | C1H7g25238 | CX7g046883 | - | - | - | Detail |
| C2H7g12471 | 7:1,319,741-1,320,250 | + | C1H7g03279 | CX7g046883 | LOC_Os07g03288 | Os07g0126401 | - | Detail |
| C2H7g06062 | 7:1,323,313-1,323,831 | + | C1H7g21567 | CX7g046883 | LOC_Os07g03319 | Os07g0125201 | - | Detail |
| C2H7g12596 | 7:1,325,430-1,325,957 | + | C1H7g06276 | CX7g046883 | LOC_Os07g03600 | Os07g0127700 | - | Detail |
| C2H7g00385 | 7:1,330,158-1,330,667 | + | C1H7g27056 | CX7g046883 | LOC_Os07g03610 | Os07g0127900 | - | Detail |
| C2H7g14288 | 7:1,333,441-1,333,956 | + | C1H7g27056 | CX7g046883 | LOC_Os07g03620 | Os07g0127900 | - | Detail |
| C2H7g25556 | 7:1,336,239-1,336,760 | + | C1H7g27056 | CX7g046883 | LOC_Os07g03620 | Os07g0127900 | - | Detail |
| C2H7g09311 | 7:1,344,372-1,344,617 | - | - | CX2g021818 | - | - | - | Detail |
| C2H7g12708 | 7:1,344,825-1,349,169 | + | C1H2g04979 | CX7g049690 | - | - | - | Detail |
| C2H7g20797 | 7:1,365,749-1,366,294 | + | C1H7g00732 | CX7g046883 | LOC_Os07g03680 | Os07g0127700 | - | Detail |
| C2H7g30099 | 7:1,369,169-1,369,687 | + | C1H7g07379 | CX7g046883 | LOC_Os07g03690 | Os07g0128800 | - | Detail |
| C2H7g02005 | 7:1,376,734-1,377,240 | + | C1H7g03279 | CX7g046883 | LOC_Os07g03710 | Os07g0129200 | PR1A, OsPR1a, OsPR-1a, PR1a, OsPR1#074, OsPR1-74, PR-1a, OsSCP, SCP | Detail |
| C2H7g27869 | 7:1,382,172-1,382,672 | + | C1H7g03279 | CX7g046883 | LOC_Os07g03730 | Os07g0129300 | OsPR1aL | Detail |
| C2H7g30381 | 7:1,386,469-1,386,984 | + | C1H7g07379 | CX7g046883 | LOC_Os07g03750 | Os07g0127700 | - | Detail |
| C2H7g21640 | 7:1,388,204-1,390,685 | - | C1H7g25003 | CX7g049764 | LOC_Os07g03760 | - | - | Detail |
| C2H7g07364 | 7:1,418,866-1,424,814 | + | C1H7g21106 | CX7g047059 | LOC_Os07g03770 | Os07g0129700 | OSH15, Oskn3 | Detail |
| C2H7g12349 | 7:1,435,325-1,437,829 | - | C1H7g23406 | - | LOC_Os07g03780 | Os07g0129800 | - | Detail |
| C2H7g17374 | 7:1,440,804-1,442,726 | - | C1H7g13341 | - | LOC_Os07g03790 | Os07g0129900 | - | Detail |
| C2H7g09208 | 7:1,445,267-1,446,277 | + | C1H7g01046 | - | LOC_Os07g02770 | Os07g0130000 | - | Detail |
| C2H7g09142 | 7:1,447,373-1,448,693 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034946 | 4:29,544,789-29,548,294 | - | C1H4g10516 | C2H4g09887 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| CX4g034217 | 4:29,559,319-29,562,000 | - | C1H4g18642 | C2H4g11022 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| CX4g034187 | 4:29,563,974-29,567,346 | - | C1H4g10863 | C2H4g26599 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| CX4g036532 | 4:29,570,099-29,576,184 | - | C1H4g29876 | C2H4g28020 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| CX4g032181 | 4:29,591,207-29,594,245 | - | C1H4g03758 | C2H4g22256 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| CX4g031927 | 4:29,606,374-29,610,757 | - | C1H4g28972 | C2H4g16737 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| CX4g031948 | 4:29,613,998-29,617,200 | - | C1H4g18744 | C2H4g14699 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| CX4g034422 | 4:29,624,116-29,629,994 | - | C1H4g12099 | C2H4g18413 | LOC_Os04g57670 | Os04g0672700 | - | Detail |
| CX4g031387 | 4:29,631,826-29,634,821 | + | C1H4g02898 | C2H4g13935 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| CX4g034255 | 4:29,636,164-29,638,564 | + | C1H4g21333 | C2H4g25125 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| CX4g032895 | 4:29,640,955-29,645,013 | - | C1H4g29753 | C2H4g28032 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| CX4g036002 | 4:29,668,085-29,668,554 | + | C1H4g17441 | C2H4g17256 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| CX4g033276 | 4:29,676,526-29,679,750 | - | C1H4g06545 | C2H4g16666 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| CX4g032931 | 4:29,682,415-29,683,042 | - | C1H4g12522 | C2H4g21541 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| CX4g035487 | 4:29,684,895-29,685,598 | - | C1H6g31651 | - | - | - | - | Detail |
| CX4g036442 | 4:29,687,627-29,688,619 | + | - | - | - | - | - | Detail |
| CX4g033668 | 4:29,696,393-29,699,335 | - | C1H4g25879 | C2H4g22422 | LOC_Os04g57780 | Os04g0674100 | - | Detail |
| CX4g033580 | 4:29,704,933-29,706,167 | + | C1H4g19205 | C2H4g06265 | LOC_Os04g57790 | Os04g0674200 | - | Detail |
| CX4g034130 | 4:29,707,137-29,710,871 | - | C1H4g22285 | C2H4g15166 | LOC_Os04g57800 | Os04g0674300 | - | Detail |
| CX4g032486 | 4:29,714,463-29,716,437 | + | C1H4g13095 | C2H4g23831 | LOC_Os04g57810 | Os04g0674400 | OsDRE2a | Detail |