| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g17585 | 11:14,655,902-14,659,115 | - | C2H11g23712 | CX11g012079 | LOC_Os11g28530 | Os11g0474800 | OsDTC2, OsKS8, OsKSL8 | Detail |
| C1H11g20376 | 11:14,706,687-14,708,705 | - | C2H11g04744 | CX11g011709 | - | - | - | Detail |
| C1H11g15513 | 11:14,730,646-14,733,463 | + | C2H11g26477 | - | - | - | - | Detail |
| C1H11g28807 | 11:14,828,119-14,830,364 | + | C2H11g19542 | CX11g014811 | LOC_Os11g28910 | - | - | Detail |
| C1H11g20098 | 11:14,863,971-14,864,759 | + | C2H11g11493 | CX11g011635 | LOC_Os11g28940 | Os11g0479000 | - | Detail |
| C1H11g28558 | 11:14,872,767-14,875,014 | - | C2H11g01202 | CX11g010946 | LOC_Os11g28950 | Os11g0479100 | - | Detail |
| C1H11g15225 | 11:14,879,248-14,880,351 | - | C2H11g01202 | CX11g010946 | LOC_Os11g28950 | Os11g0479100 | - | Detail |
| C1H11g07027 | 11:14,896,510-14,904,056 | + | C2H11g15927 | CX11g012468 | LOC_Os11g28980 | Os11g0479232 | - | Detail |
| C1H11g00739 | 11:14,907,939-14,912,921 | + | C2H11g26216 | CX11g013696 | LOC_Os11g28990 | Os11g0479300 | - | Detail |
| C1H11g14827 | 11:14,927,608-14,931,608 | + | C2H11g17613 | CX11g014028 | LOC_Os11g29110 | Os11g0481150 | - | Detail |
| C1H11g29340 | 11:14,933,483-14,939,207 | - | C2H11g03259 | CX11g014019 | LOC_Os11g29120 | Os11g0481200 | - | Detail |
| C1H11g14983 | 11:14,957,832-14,981,487 | + | C2H11g03891 | CX11g014052 | LOC_Os11g29150 | Os11g0481600 | - | Detail |
| C1H11g16656 | 11:14,985,367-14,990,697 | - | C2H11g20744 | CX11g013230 | LOC_Os11g29190 | Os11g0482000 | - | Detail |
| C1H11g19605 | 11:14,994,070-15,006,297 | + | C2H11g05462 | CX11g012684 | LOC_Os11g29200 | Os11g0482100 | - | Detail |
| C1H11g28413 | 11:15,006,832-15,008,439 | - | C2H11g19108 | CX11g013737 | - | Os11g0482200 | - | Detail |
| C1H11g31744 | 11:15,012,236-15,014,974 | + | C2H11g08765 | CX11g012846 | LOC_Os11g29230 | Os11g0482400 | - | Detail |
| C1H11g27137 | 11:15,017,603-15,022,921 | - | C2H11g07778 | CX11g010897 | LOC_Os11g29240 | Os11g0482500 | - | Detail |
| C1H11g01471 | 11:15,048,236-15,049,924 | + | C2H11g18072 | CX11g014481 | LOC_Os11g29290 | Os11g0483000 | HAN1 | Detail |
| C1H11g27214 | 11:15,074,272-15,074,761 | + | C2H11g03463 | CX11g014537 | LOC_Os11g29340 | Os11g0483600 | - | Detail |
| C1H11g27393 | 11:15,093,359-15,097,225 | + | C2H11g15778 | CX11g013818 | LOC_Os11g29350 | Os11g0483900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034946 | 4:29,544,789-29,548,294 | - | C1H4g10516 | C2H4g09887 | LOC_Os04g57560 | Os04g0671300 | PAO5, OsPAO5, OsAO2, AO2 | Detail |
| CX4g034217 | 4:29,559,319-29,562,000 | - | C1H4g18642 | C2H4g11022 | LOC_Os04g57590 | Os04g0671700 | OsDJ-1C | Detail |
| CX4g034187 | 4:29,563,974-29,567,346 | - | C1H4g10863 | C2H4g26599 | LOC_Os04g57600 | Os04g0671800 | - | Detail |
| CX4g036532 | 4:29,570,099-29,576,184 | - | C1H4g29876 | C2H4g28020 | LOC_Os04g57610 | Os04g0671900 | - | Detail |
| CX4g032181 | 4:29,591,207-29,594,245 | - | C1H4g03758 | C2H4g22256 | LOC_Os04g57630 | Os04g0672100 | OsPSKR2 | Detail |
| CX4g031927 | 4:29,606,374-29,610,757 | - | C1H4g28972 | C2H4g16737 | LOC_Os04g57640 | Os04g0672200 | - | Detail |
| CX4g031948 | 4:29,613,998-29,617,200 | - | C1H4g18744 | C2H4g14699 | LOC_Os04g57650 | Os04g0672300 | - | Detail |
| CX4g034422 | 4:29,624,116-29,629,994 | - | C1H4g12099 | C2H4g18413 | LOC_Os04g57670 | Os04g0672700 | - | Detail |
| CX4g031387 | 4:29,631,826-29,634,821 | + | C1H4g02898 | C2H4g13935 | LOC_Os04g57680 | Os04g0672800 | - | Detail |
| CX4g034255 | 4:29,636,164-29,638,564 | + | C1H4g21333 | C2H4g25125 | LOC_Os04g57690 | Os04g0672900 | - | Detail |
| CX4g032895 | 4:29,640,955-29,645,013 | - | C1H4g29753 | C2H4g28032 | LOC_Os04g57700 | Os04g0673000 | - | Detail |
| CX4g036002 | 4:29,668,085-29,668,554 | + | C1H4g17441 | C2H4g17256 | LOC_Os04g57720 | Os04g0673300 | RR6, OsRR6, rr6, Rra6, OsRRA6 | Detail |
| CX4g033276 | 4:29,676,526-29,679,750 | - | C1H4g06545 | C2H4g16666 | LOC_Os04g57730 | Os04g0673400 | - | Detail |
| CX4g032931 | 4:29,682,415-29,683,042 | - | C1H4g12522 | C2H4g21541 | LOC_Os04g57750 | Os04g0673800 | - | Detail |
| CX4g035487 | 4:29,684,895-29,685,598 | - | C1H6g31651 | - | - | - | - | Detail |
| CX4g036442 | 4:29,687,627-29,688,619 | + | - | - | - | - | - | Detail |
| CX4g033668 | 4:29,696,393-29,699,335 | - | C1H4g25879 | C2H4g22422 | LOC_Os04g57780 | Os04g0674100 | - | Detail |
| CX4g033580 | 4:29,704,933-29,706,167 | + | C1H4g19205 | C2H4g06265 | LOC_Os04g57790 | Os04g0674200 | - | Detail |
| CX4g034130 | 4:29,707,137-29,710,871 | - | C1H4g22285 | C2H4g15166 | LOC_Os04g57800 | Os04g0674300 | - | Detail |
| CX4g032486 | 4:29,714,463-29,716,437 | + | C1H4g13095 | C2H4g23831 | LOC_Os04g57810 | Os04g0674400 | OsDRE2a | Detail |