| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g04022 | 2:9,880,559-9,885,936 | - | C1H2g03705 | CX2g023179 | LOC_Os02g18850 | Os02g0290600 | - | Detail |
| C2H2g27882 | 2:9,889,619-9,896,109 | + | C1H2g19174 | CX2g021063 | LOC_Os02g18870 | Os02g0290900 | RMS2, OsGELP34 | Detail |
| C2H2g09316 | 2:9,897,030-9,899,051 | - | C1H2g18785 | CX2g022530 | LOC_Os02g18880 | Os02g0291000 | OsCBL7 | Detail |
| C2H2g12151 | 2:9,929,228-9,931,346 | - | C1H2g08103 | CX2g024048 | LOC_Os02g18930 | Os02g0291400 | OsCBL8 | Detail |
| C2H2g08561 | 2:9,934,265-9,939,310 | - | C1H2g29499 | CX2g023847 | LOC_Os02g18940 | Os02g0291500 | - | Detail |
| C2H2g11993 | 2:9,979,587-9,984,141 | + | C1H2g21983 | CX2g019458 | LOC_Os02g18954 | Os02g0291600 | - | Detail |
| C2H2g28559 | 2:10,020,041-10,020,563 | + | - | - | LOC_Os02g19040 | Os02g0292600 | - | Detail |
| C2H2g15520 | 2:10,021,392-10,021,652 | + | C1H2g10212 | CX2g024262 | LOC_Os02g19040 | Os02g0292600 | - | Detail |
| C2H2g17902 | 2:10,022,228-10,023,864 | + | C1H2g10212 | CX2g024262 | LOC_Os02g19040 | Os02g0292600 | - | Detail |
| C2H2g28323 | 2:10,030,983-10,031,818 | - | C1H2g22313 | CX2g023282 | LOC_Os02g19060 | Os02g0292800 | - | Detail |
| C2H2g20322 | 2:10,044,923-10,045,602 | + | - | - | - | - | - | Detail |
| C2H2g12359 | 2:10,047,354-10,049,975 | + | C1H2g17881 | CX2g022598 | LOC_Os02g19130 | Os02g0293300 | OsFDML1 | Detail |
| C2H2g14397 | 2:10,052,959-10,056,258 | - | C1H2g17598 | CX2g019634 | LOC_Os02g19140 | Os02g0293400 | RIP1 | Detail |
| C2H2g23205 | 2:10,057,671-10,065,967 | - | C1H2g03073 | CX2g023344 | LOC_Os02g19150 | Os02g0293500 | - | Detail |
| C2H2g06513 | 2:10,067,227-10,072,912 | + | C1H2g22985 | - | - | - | - | Detail |
| C2H2g04043 | 2:10,075,433-10,077,976 | + | C1H2g22314 | CX2g020939 | LOC_Os02g19170 | Os02g0293800 | - | Detail |
| C2H2g04664 | 2:10,082,276-10,085,828 | - | C1H2g14610 | - | - | - | - | Detail |
| C2H2g10793 | 2:10,089,252-10,090,316 | + | C1H2g30462 | CX2g021743 | LOC_Os02g19380 | Os02g0294000 | - | Detail |
| C2H2g23302 | 2:10,101,317-10,107,607 | + | C1H2g06538 | CX2g024663 | LOC_Os02g19210 | Os02g0294600 | - | Detail |
| C2H2g17946 | 2:10,110,858-10,119,722 | - | C1H2g04325 | CX2g023610 | LOC_Os02g19220 | Os02g0294700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035618 | 4:29,439,231-29,441,671 | - | C1H4g11017 | C2H4g10649 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| CX4g035266 | 4:29,443,952-29,445,514 | - | C1H4g09478 | C2H4g23402 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| CX4g032933 | 4:29,448,262-29,448,819 | - | C1H4g01273 | C2H4g26783 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| CX4g033726 | 4:29,451,769-29,455,324 | + | C1H4g10679 | C2H4g26457 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| CX4g032922 | 4:29,456,194-29,456,981 | + | - | C2H4g10159 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| CX4g034719 | 4:29,462,352-29,464,706 | - | C1H4g10307 | C2H4g05368 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| CX4g032862 | 4:29,465,085-29,466,604 | - | C1H4g20800 | C2H4g28278 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| CX4g032503 | 4:29,467,780-29,470,479 | - | C1H4g20558 | C2H4g09192 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| CX4g034572 | 4:29,473,470-29,476,106 | - | C1H4g00350 | C2H4g18679 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| CX4g034090 | 4:29,478,717-29,480,476 | + | C1H4g00962 | C2H4g24032 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| CX4g032241 | 4:29,483,660-29,484,865 | - | - | - | - | Os04g0670150 | - | Detail |
| CX4g033521 | 4:29,485,661-29,488,731 | - | C1H4g27420 | C2H4g02826 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| CX4g031684 | 4:29,493,929-29,497,592 | - | C1H4g13887 | C2H4g28360 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| CX4g032812 | 4:29,498,161-29,499,851 | + | C1H4g28653 | C2H4g01861 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| CX4g032203 | 4:29,502,326-29,503,995 | + | C1H4g15123 | C2H4g11996 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| CX4g036015 | 4:29,504,440-29,507,117 | - | C1H4g12548 | C2H4g00725 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| CX4g033656 | 4:29,511,421-29,517,795 | + | C1H4g28067 | C2H4g29038 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| CX4g035876 | 4:29,530,817-29,533,008 | - | C1H4g24932 | C2H4g16367 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| CX4g035340 | 4:29,537,172-29,539,240 | - | C1H4g07972 | C2H4g09789 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| CX4g036253 | 4:29,540,434-29,543,048 | - | C1H4g22743 | C2H4g30313 | LOC_Os04g57550 | Os04g0671200 | - | Detail |