| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g27801 | 12:7,102,512-7,103,348 | - | - | CX4g031975 | - | - | - | Detail |
| C2H12g00174 | 12:7,205,207-7,206,757 | - | C1H12g25021 | CX12g017143 | - | - | - | Detail |
| C2H12g12831 | 12:7,222,997-7,225,325 | - | C1H12g04637 | CX12g016695 | LOC_Os08g19190 | - | - | Detail |
| C2H12g27392 | 12:7,226,576-7,236,632 | - | C1H12g15591 | - | - | Os12g0254400 | - | Detail |
| C2H12g11209 | 12:7,243,832-7,252,324 | + | C1H12g02627 | - | - | Os12g0254825 | - | Detail |
| C2H12g08198 | 12:7,274,844-7,287,016 | - | C1H12g20413 | CX12g017708 | LOC_Os12g15314 | Os12g0255200 | - | Detail |
| C2H12g02077 | 12:7,312,918-7,313,211 | + | - | - | - | - | - | Detail |
| C2H12g01799 | 12:7,364,870-7,369,510 | + | C1H12g15074 | CX12g018677 | LOC_Os12g15400 | Os12g0256000 | - | Detail |
| C2H12g15630 | 12:7,374,428-7,379,072 | + | C1H12g21694 | CX12g015331 | LOC_Os12g15420 | Os12g0256300 | - | Detail |
| C2H12g28845 | 12:7,383,496-7,384,531 | - | - | - | - | - | - | Detail |
| C2H12g05943 | 12:7,384,711-7,385,390 | - | C1H12g19394 | CX12g017265 | LOC_Os12g15440 | Os12g0521300 | - | Detail |
| C2H12g10496 | 12:7,385,882-7,387,338 | - | - | - | - | - | - | Detail |
| C2H12g25675 | 12:7,387,010-7,392,016 | + | C1H12g03411 | CX12g015540 | LOC_Os12g15450 | Os12g0256800 | - | Detail |
| C2H12g10489 | 12:7,403,019-7,408,064 | - | C1H12g10300 | CX12g015137 | LOC_Os12g15470 | Os12g0257000 | - | Detail |
| C2H12g05449 | 12:7,416,909-7,417,103 | + | C1H12g30197 | CX12g016464 | - | Os12g0257400 | - | Detail |
| C2H12g18429 | 12:7,417,132-7,418,445 | + | - | CX12g016464 | LOC_Os12g15490 | Os12g0257400 | - | Detail |
| C2H12g19352 | 12:7,444,421-7,449,641 | + | C1H12g31183 | CX12g016987 | LOC_Os12g15520 | Os12g0257500 | - | Detail |
| C2H12g11192 | 12:7,456,155-7,459,707 | + | C1H12g12476 | CX12g017683 | LOC_Os12g15920 | Os12g0257600 | - | Detail |
| C2H12g02763 | 12:7,497,646-7,505,545 | - | C1H12g26697 | CX12g016955 | LOC_Os12g15590 | Os12g0258200 | OsERdj7 | Detail |
| C2H12g12149 | 12:7,508,746-7,509,138 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035618 | 4:29,439,231-29,441,671 | - | C1H4g11017 | C2H4g10649 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| CX4g035266 | 4:29,443,952-29,445,514 | - | C1H4g09478 | C2H4g23402 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| CX4g032933 | 4:29,448,262-29,448,819 | - | C1H4g01273 | C2H4g26783 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| CX4g033726 | 4:29,451,769-29,455,324 | + | C1H4g10679 | C2H4g26457 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| CX4g032922 | 4:29,456,194-29,456,981 | + | - | C2H4g10159 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| CX4g034719 | 4:29,462,352-29,464,706 | - | C1H4g10307 | C2H4g05368 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| CX4g032862 | 4:29,465,085-29,466,604 | - | C1H4g20800 | C2H4g28278 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| CX4g032503 | 4:29,467,780-29,470,479 | - | C1H4g20558 | C2H4g09192 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| CX4g034572 | 4:29,473,470-29,476,106 | - | C1H4g00350 | C2H4g18679 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| CX4g034090 | 4:29,478,717-29,480,476 | + | C1H4g00962 | C2H4g24032 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| CX4g032241 | 4:29,483,660-29,484,865 | - | - | - | - | Os04g0670150 | - | Detail |
| CX4g033521 | 4:29,485,661-29,488,731 | - | C1H4g27420 | C2H4g02826 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| CX4g031684 | 4:29,493,929-29,497,592 | - | C1H4g13887 | C2H4g28360 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| CX4g032812 | 4:29,498,161-29,499,851 | + | C1H4g28653 | C2H4g01861 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| CX4g032203 | 4:29,502,326-29,503,995 | + | C1H4g15123 | C2H4g11996 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| CX4g036015 | 4:29,504,440-29,507,117 | - | C1H4g12548 | C2H4g00725 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| CX4g033656 | 4:29,511,421-29,517,795 | + | C1H4g28067 | C2H4g29038 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| CX4g035876 | 4:29,530,817-29,533,008 | - | C1H4g24932 | C2H4g16367 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| CX4g035340 | 4:29,537,172-29,539,240 | - | C1H4g07972 | C2H4g09789 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| CX4g036253 | 4:29,540,434-29,543,048 | - | C1H4g22743 | C2H4g30313 | LOC_Os04g57550 | Os04g0671200 | - | Detail |