| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g02339 | 2:6,255,284-6,260,348 | - | C2H2g08176 | CX2g024197 | LOC_Os02g12730 | Os02g0219200 | - | Detail |
| C1H2g22063 | 2:6,268,058-6,272,187 | - | C2H2g25287 | CX2g024846 | LOC_Os02g12740 | Os02g0219400 | OsGPI8 | Detail |
| C1H2g00777 | 2:6,273,365-6,276,331 | + | C2H2g26355 | CX2g024479 | LOC_Os02g12750 | Os02g0219800 | OsTET2 | Detail |
| C1H2g30667 | 2:6,276,874-6,279,285 | - | C2H2g23365 | CX2g021650 | LOC_Os02g12760 | Os02g0219900 | - | Detail |
| C1H2g24521 | 2:6,287,517-6,289,321 | + | C2H2g09377 | CX2g022104 | LOC_Os02g12780 | Os02g0220000 | OsCKX6 | Detail |
| C1H2g15795 | 2:6,302,079-6,304,178 | + | C2H2g12835 | CX2g022995 | LOC_Os02g12780 | Os02g0220100 | OsCKX7 | Detail |
| C1H2g30241 | 2:6,316,239-6,318,106 | - | C2H2g28607 | CX2g024290 | LOC_Os02g12790 | Os02g0220400 | CGA1, Cga1, OsCga1, OsCGA1, OsGATA11, GATA11 | Detail |
| C1H2g23503 | 2:6,327,275-6,330,726 | + | C2H2g14333 | CX2g019563 | LOC_Os02g12794 | Os02g0220500 | - | Detail |
| C1H2g00344 | 2:6,333,112-6,337,121 | + | C2H2g18250 | CX2g019782 | LOC_Os02g12794 | Os02g0220600 | - | Detail |
| C1H2g04441 | 2:6,338,080-6,344,404 | - | C2H2g03696 | CX2g024312 | LOC_Os02g12810 | Os02g0220700 | - | Detail |
| C1H2g21438 | 2:6,354,064-6,358,481 | - | C2H2g00523 | CX2g024912 | LOC_Os02g12820 | Os02g0221100 | - | Detail |
| C1H2g15495 | 2:6,376,858-6,380,164 | - | C2H2g12344 | - | - | - | - | Detail |
| C1H2g12870 | 2:6,384,526-6,389,058 | + | C2H2g11540 | CX2g022115 | LOC_Os02g12840 | Os02g0221300 | - | Detail |
| C1H2g13065 | 2:6,399,678-6,402,831 | - | C2H2g13827 | CX2g023110 | LOC_Os02g12850 | Os02g0221500 | - | Detail |
| C1H2g20786 | 2:6,405,739-6,409,891 | + | C2H2g10410 | CX2g021581 | - | Os02g0221600 | - | Detail |
| C1H2g10087 | 2:6,412,396-6,416,251 | + | C2H2g06088 | CX2g021336 | LOC_Os02g12880 | Os02g0221800 | - | Detail |
| C1H2g03914 | 2:6,416,377-6,418,853 | - | C2H2g18416 | CX2g021518 | LOC_Os02g12890 | Os02g0221900 | - | Detail |
| C1H2g18447 | 2:6,424,161-6,427,646 | + | C2H2g22233 | CX2g020786 | LOC_Os02g12900 | Os02g0222100 | - | Detail |
| C1H2g12833 | 2:6,428,833-6,431,904 | + | C2H2g17422 | CX2g020146 | LOC_Os02g12910 | Os02g0222200 | - | Detail |
| C1H2g03239 | 2:6,439,736-6,440,110 | - | C2H6g27200 | CX2g024169 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035618 | 4:29,439,231-29,441,671 | - | C1H4g11017 | C2H4g10649 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| CX4g035266 | 4:29,443,952-29,445,514 | - | C1H4g09478 | C2H4g23402 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| CX4g032933 | 4:29,448,262-29,448,819 | - | C1H4g01273 | C2H4g26783 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| CX4g033726 | 4:29,451,769-29,455,324 | + | C1H4g10679 | C2H4g26457 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| CX4g032922 | 4:29,456,194-29,456,981 | + | - | C2H4g10159 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| CX4g034719 | 4:29,462,352-29,464,706 | - | C1H4g10307 | C2H4g05368 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| CX4g032862 | 4:29,465,085-29,466,604 | - | C1H4g20800 | C2H4g28278 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| CX4g032503 | 4:29,467,780-29,470,479 | - | C1H4g20558 | C2H4g09192 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| CX4g034572 | 4:29,473,470-29,476,106 | - | C1H4g00350 | C2H4g18679 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| CX4g034090 | 4:29,478,717-29,480,476 | + | C1H4g00962 | C2H4g24032 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| CX4g032241 | 4:29,483,660-29,484,865 | - | - | - | - | Os04g0670150 | - | Detail |
| CX4g033521 | 4:29,485,661-29,488,731 | - | C1H4g27420 | C2H4g02826 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| CX4g031684 | 4:29,493,929-29,497,592 | - | C1H4g13887 | C2H4g28360 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| CX4g032812 | 4:29,498,161-29,499,851 | + | C1H4g28653 | C2H4g01861 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| CX4g032203 | 4:29,502,326-29,503,995 | + | C1H4g15123 | C2H4g11996 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| CX4g036015 | 4:29,504,440-29,507,117 | - | C1H4g12548 | C2H4g00725 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| CX4g033656 | 4:29,511,421-29,517,795 | + | C1H4g28067 | C2H4g29038 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| CX4g035876 | 4:29,530,817-29,533,008 | - | C1H4g24932 | C2H4g16367 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| CX4g035340 | 4:29,537,172-29,539,240 | - | C1H4g07972 | C2H4g09789 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| CX4g036253 | 4:29,540,434-29,543,048 | - | C1H4g22743 | C2H4g30313 | LOC_Os04g57550 | Os04g0671200 | - | Detail |