| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g14223 | 12:16,654,510-16,655,973 | + | C2H12g16950 | CX12g017413 | LOC_Os12g32380 | Os12g0508300 | - | Detail |
| C1H12g04208 | 12:16,664,823-16,667,718 | + | C2H12g15579 | CX12g015589 | LOC_Os12g32390 | Os12g0508400 | - | Detail |
| C1H12g20034 | 12:16,670,612-16,671,628 | + | C2H12g17897 | CX12g015589 | LOC_Os12g32400 | Os12g0508500 | OsbHLH133 | Detail |
| C1H12g01026 | 12:16,674,395-16,674,772 | - | C2H12g05290 | CX12g016543 | - | - | - | Detail |
| C1H12g18134 | 12:16,699,662-16,701,889 | - | C2H12g28152 | - | LOC_Os12g32580 | - | - | Detail |
| C1H12g03703 | 12:16,707,990-16,709,113 | + | C2H12g26520 | CX12g016850 | - | - | - | Detail |
| C1H12g21922 | 12:16,717,076-16,717,663 | - | C2H12g14514 | CX12g017324 | LOC_Os12g32610 | Os12g0510750 | OsSMP2 | Detail |
| C1H12g07006 | 12:16,724,311-16,726,237 | + | C2H12g23023 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C1H12g03851 | 12:16,728,882-16,731,557 | - | C2H12g01778 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C1H12g10988 | 12:16,735,500-16,738,577 | + | C2H12g29019 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C1H12g02725 | 12:16,740,629-16,743,267 | + | C2H12g27722 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C1H12g25225 | 12:16,744,410-16,749,593 | - | C2H12g10634 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C1H12g13852 | 12:16,765,611-16,766,183 | + | - | - | - | - | - | Detail |
| C1H12g00024 | 12:16,767,555-16,771,769 | - | C2H12g02344 | CX12g015919 | LOC_Os12g32670 | Os12g0511500 | - | Detail |
| C1H12g02230 | 12:16,796,008-16,803,454 | + | C2H12g11130 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C1H12g03710 | 12:16,805,333-16,808,517 | - | C2H12g25999 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C1H12g17769 | 12:16,819,510-16,828,462 | - | C2H12g03027 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C1H12g27986 | 12:16,842,724-16,845,399 | - | C2H12g05645 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C1H12g26954 | 12:16,866,690-16,867,964 | - | C2H12g07164 | CX12g018119 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C1H12g12598 | 12:16,884,466-16,884,777 | + | - | CX1g002184 | LOC_Os10g20310 | Os10g0343900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035618 | 4:29,439,231-29,441,671 | - | C1H4g11017 | C2H4g10649 | LOC_Os04g57320 | Os04g0668900 | IM1, OsIM1, OsIM1a, OsIM2, OsIM, PTOX1 | Detail |
| CX4g035266 | 4:29,443,952-29,445,514 | - | C1H4g09478 | C2H4g23402 | LOC_Os04g57330 | Os04g0669100 | - | Detail |
| CX4g032933 | 4:29,448,262-29,448,819 | - | C1H4g01273 | C2H4g26783 | LOC_Os04g57340 | Os04g0669200 | - | Detail |
| CX4g033726 | 4:29,451,769-29,455,324 | + | C1H4g10679 | C2H4g26457 | LOC_Os04g57350 | Os04g0669300 | - | Detail |
| CX4g032922 | 4:29,456,194-29,456,981 | + | - | C2H4g10159 | LOC_Os04g57360 | Os04g0669475 | - | Detail |
| CX4g034719 | 4:29,462,352-29,464,706 | - | C1H4g10307 | C2H4g05368 | LOC_Os04g57370 | Os04g0669500 | - | Detail |
| CX4g032862 | 4:29,465,085-29,466,604 | - | C1H4g20800 | C2H4g28278 | LOC_Os04g57380 | Os04g0669600 | - | Detail |
| CX4g032503 | 4:29,467,780-29,470,479 | - | C1H4g20558 | C2H4g09192 | LOC_Os04g57400 | Os04g0669800 | - | Detail |
| CX4g034572 | 4:29,473,470-29,476,106 | - | C1H4g00350 | C2H4g18679 | LOC_Os04g57410 | Os04g0669900 | - | Detail |
| CX4g034090 | 4:29,478,717-29,480,476 | + | C1H4g00962 | C2H4g24032 | LOC_Os04g57420 | Os04g0670000 | - | Detail |
| CX4g032241 | 4:29,483,660-29,484,865 | - | - | - | - | Os04g0670150 | - | Detail |
| CX4g033521 | 4:29,485,661-29,488,731 | - | C1H4g27420 | C2H4g02826 | LOC_Os04g57440 | Os04g0670200 | - | Detail |
| CX4g031684 | 4:29,493,929-29,497,592 | - | C1H4g13887 | C2H4g28360 | LOC_Os04g57480 | Os04g0670400 | - | Detail |
| CX4g032812 | 4:29,498,161-29,499,851 | + | C1H4g28653 | C2H4g01861 | LOC_Os04g57490 | Os04g0670500 | OsCP1 | Detail |
| CX4g032203 | 4:29,502,326-29,503,995 | + | C1H4g15123 | C2H4g11996 | LOC_Os04g57500 | Os04g0670700 | - | Detail |
| CX4g036015 | 4:29,504,440-29,507,117 | - | C1H4g12548 | C2H4g00725 | LOC_Os04g57510 | Os04g0670600 | - | Detail |
| CX4g033656 | 4:29,511,421-29,517,795 | + | C1H4g28067 | C2H4g29038 | LOC_Os04g57520 | Os04g0670800 | - | Detail |
| CX4g035876 | 4:29,530,817-29,533,008 | - | C1H4g24932 | C2H4g16367 | LOC_Os04g57530 | Os04g0670900 | SH4, sh4, SH3, SH3/SH4 | Detail |
| CX4g035340 | 4:29,537,172-29,539,240 | - | C1H4g07972 | C2H4g09789 | LOC_Os04g57540 | Os04g0671100 | - | Detail |
| CX4g036253 | 4:29,540,434-29,543,048 | - | C1H4g22743 | C2H4g30313 | LOC_Os04g57550 | Os04g0671200 | - | Detail |