| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g13454 | 4:17,131,561-17,132,205 | + | C1H4g28128 | CX4g034784 | LOC_Os04g33290 | - | - | Detail |
| C2H4g13060 | 4:17,135,595-17,138,489 | + | C1H4g08917 | CX4g033122 | LOC_Os04g33300 | Os04g0405800 | - | Detail |
| C2H4g03472 | 4:17,139,962-17,141,630 | - | C1H4g24026 | CX4g032232 | LOC_Os04g33310 | Os04g0405900 | - | Detail |
| C2H4g07196 | 4:17,162,153-17,162,389 | - | C1H4g30658 | - | - | - | - | Detail |
| C2H4g21779 | 4:17,165,544-17,166,778 | - | C1H4g14696 | - | LOC_Os04g33330 | Os04g0407300 | - | Detail |
| C2H4g19229 | 4:17,178,712-17,179,848 | + | C1H4g11703 | CX4g034898 | LOC_Os04g33360 | Os04g0407800 | - | Detail |
| C2H4g17180 | 4:17,209,629-17,210,969 | - | C1H4g12008 | CX4g034577 | LOC_Os04g33450 | Os04g0408600 | - | Detail |
| C2H4g24924 | 4:17,212,760-17,213,953 | - | C1H4g11861 | CX4g033600 | LOC_Os04g33440 | Os04g0408700 | - | Detail |
| C2H4g01925 | 4:17,217,193-17,219,817 | - | C1H4g11809 | CX4g033600 | LOC_Os04g33420 | Os04g0408900 | - | Detail |
| C2H4g16116 | 4:17,222,031-17,223,967 | - | C1H4g28635 | CX4g036549 | LOC_Os04g33400 | Os04g0409100 | - | Detail |
| C2H4g00586 | 4:17,225,867-17,234,927 | - | C1H4g20347 | CX4g035756 | LOC_Os04g33460 | Os04g0409200 | OsBEIIa, OsSBE4, RBE4 | Detail |
| C2H4g11616 | 4:17,236,738-17,240,920 | - | C1H4g12620 | CX4g033786 | LOC_Os04g33470 | Os04g0409500 | - | Detail |
| C2H4g17999 | 4:17,241,061-17,246,648 | + | C1H4g14413 | CX4g032352 | LOC_Os04g33480 | Os04g0409600 | DSL1, OsHDA711 | Detail |
| C2H4g14351 | 4:17,247,219-17,249,964 | + | C1H4g17013 | CX4g032016 | LOC_Os04g33490 | Os04g0409900 | - | Detail |
| C2H4g05689 | 4:17,250,417-17,254,467 | - | C1H4g22622 | CX4g034768 | LOC_Os04g33500 | Os04g0410200 | - | Detail |
| C2H4g27427 | 4:17,266,785-17,268,844 | + | C1H4g23649 | CX4g031458 | LOC_Os04g33510 | Os04g0410300 | - | Detail |
| C2H4g01491 | 4:17,270,029-17,271,235 | + | C1H4g05147 | CX4g034502 | LOC_Os04g33520 | Os04g0410400 | - | Detail |
| C2H4g21488 | 4:17,272,204-17,272,694 | + | C1H4g10509 | - | - | - | - | Detail |
| C2H4g29020 | 4:17,273,340-17,275,048 | - | C1H4g28526 | CX4g032279 | LOC_Os04g33530 | Os04g0410600 | - | Detail |
| C2H4g02433 | 4:17,291,858-17,292,221 | - | C1H4g10207 | - | - | Os04g0411100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031479 | 4:29,320,374-29,328,396 | + | C1H4g22979 | C2H4g03747 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g031652 | 4:29,330,751-29,332,200 | + | C1H4g29852 | C2H4g03474 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g032684 | 4:29,332,938-29,338,985 | - | C1H11g04650 | C2H11g00986 | LOC_Os09g01375 | Os04g0206200 | - | Detail |
| CX4g036468 | 4:29,345,983-29,346,782 | - | C1H4g05569 | C2H4g06767 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| CX4g031983 | 4:29,347,872-29,357,065 | - | C1H4g31368 | C2H4g00020 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| CX4g036271 | 4:29,359,343-29,363,348 | + | C1H4g04023 | C2H4g16878 | - | - | - | Detail |
| CX4g034693 | 4:29,364,712-29,368,220 | - | C1H4g07804 | C2H4g30626 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| CX4g034923 | 4:29,369,553-29,369,813 | - | - | - | - | Os04g0667100 | - | Detail |
| CX4g034777 | 4:29,370,019-29,372,335 | + | C1H4g29276 | C2H4g27314 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| CX4g031690 | 4:29,377,848-29,379,277 | - | C1H4g22147 | C2H4g03010 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| CX4g033675 | 4:29,383,386-29,386,045 | - | C1H4g19147 | C2H4g20638 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| CX4g035023 | 4:29,402,579-29,403,292 | + | C1H4g27331 | C2H4g26737 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| CX4g032489 | 4:29,405,307-29,408,959 | + | C1H4g25251 | C2H4g18780 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| CX4g035437 | 4:29,410,212-29,412,057 | - | C1H4g10442 | C2H4g23930 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| CX4g031421 | 4:29,413,512-29,416,072 | + | C1H4g01418 | C2H4g04165 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| CX4g034180 | 4:29,421,762-29,421,968 | - | - | C2H4g19726 | LOC_Os04g57260 | - | - | Detail |
| CX4g032599 | 4:29,424,101-29,424,310 | - | - | C2H4g19726 | LOC_Os04g57280 | - | - | Detail |
| CX4g035483 | 4:29,426,392-29,427,654 | + | C1H4g14062 | C2H4g12154 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| CX4g031851 | 4:29,430,488-29,431,942 | - | - | C2H4g10729 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| CX4g033794 | 4:29,434,963-29,438,561 | + | C1H4g07320 | C2H4g24314 | LOC_Os04g57310 | Os04g0668800 | - | Detail |