| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10005 | 3:21,579,075-21,586,255 | + | C1H3g29822 | CX3g030220 | LOC_Os03g42010 | Os03g0616300 | - | Detail |
| C2H3g25190 | 3:21,587,280-21,592,937 | + | C1H3g02131 | CX3g027194 | LOC_Os03g42020 | Os03g0616400 | - | Detail |
| C2H3g04640 | 3:21,596,020-21,601,382 | - | C1H3g04775 | CX3g028407 | LOC_Os03g42040 | Os03g0616500 | - | Detail |
| C2H3g04177 | 3:21,605,904-21,621,533 | - | C1H3g10684 | CX3g025679 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| C2H3g24758 | 3:21,657,707-21,659,159 | - | C1H3g02090 | CX3g029365 | LOC_Os03g42070 | Os03g0617500 | - | Detail |
| C2H3g20240 | 3:21,687,360-21,691,397 | - | C1H3g25739 | CX3g028127 | LOC_Os03g42110 | Os03g0617900 | - | Detail |
| C2H3g19029 | 3:21,703,153-21,705,122 | - | C1H3g17864 | CX3g025773 | LOC_Os03g42130 | Os03g0618300 | - | Detail |
| C2H3g03302 | 3:21,741,991-21,747,226 | + | C1H3g03687 | CX3g029634 | LOC_Os03g42220 | Os03g0619400 | - | Detail |
| C2H3g27772 | 3:21,749,049-21,751,758 | + | C1H3g26153 | CX3g026756 | LOC_Os03g42230 | Os03g0619600 | - | Detail |
| C2H3g24221 | 3:21,754,951-21,761,688 | + | C1H3g06725 | CX3g025711 | LOC_Os03g42240 | Os03g0619800 | - | Detail |
| C2H3g00057 | 3:21,768,006-21,770,471 | + | C1H3g18743 | CX3g025711 | LOC_Os03g42230 | Os03g0619850 | - | Detail |
| C2H3g18118 | 3:21,779,199-21,780,935 | + | C1H3g14727 | CX3g026756 | LOC_Os03g42280 | Os03g0620400 | - | Detail |
| C2H3g09124 | 3:21,787,740-21,788,734 | + | C1H3g10562 | CX3g026756 | LOC_Os03g42240 | Os03g0620500 | - | Detail |
| C2H3g05492 | 3:21,789,938-21,791,210 | + | C1H3g27023 | CX3g025711 | LOC_Os03g42290 | Os03g0620400 | - | Detail |
| C2H3g20166 | 3:21,796,312-21,798,601 | - | C1H3g12219 | CX3g028574 | LOC_Os03g42320 | Os03g0620800 | - | Detail |
| C2H3g29208 | 3:21,814,631-21,816,352 | + | C1H3g22508 | CX3g028555 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| C2H3g02303 | 3:21,822,971-21,826,473 | + | C1H3g22508 | CX3g028555 | LOC_Os03g42350 | Os03g0621400 | - | Detail |
| C2H3g25619 | 3:21,833,331-21,838,329 | + | C1H3g04432 | CX3g025711 | LOC_Os03g42370 | Os03g0621600 | - | Detail |
| C2H3g10252 | 3:21,840,549-21,842,513 | + | C1H3g02847 | CX3g025711 | LOC_Os03g42410 | Os03g0621650 | - | Detail |
| C2H3g03230 | 3:21,844,899-21,848,515 | + | C1H3g27507 | CX3g025711 | LOC_Os03g42410 | Os03g0621900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031479 | 4:29,320,374-29,328,396 | + | C1H4g22979 | C2H4g03747 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g031652 | 4:29,330,751-29,332,200 | + | C1H4g29852 | C2H4g03474 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g032684 | 4:29,332,938-29,338,985 | - | C1H11g04650 | C2H11g00986 | LOC_Os09g01375 | Os04g0206200 | - | Detail |
| CX4g036468 | 4:29,345,983-29,346,782 | - | C1H4g05569 | C2H4g06767 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| CX4g031983 | 4:29,347,872-29,357,065 | - | C1H4g31368 | C2H4g00020 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| CX4g036271 | 4:29,359,343-29,363,348 | + | C1H4g04023 | C2H4g16878 | - | - | - | Detail |
| CX4g034693 | 4:29,364,712-29,368,220 | - | C1H4g07804 | C2H4g30626 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| CX4g034923 | 4:29,369,553-29,369,813 | - | - | - | - | Os04g0667100 | - | Detail |
| CX4g034777 | 4:29,370,019-29,372,335 | + | C1H4g29276 | C2H4g27314 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| CX4g031690 | 4:29,377,848-29,379,277 | - | C1H4g22147 | C2H4g03010 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| CX4g033675 | 4:29,383,386-29,386,045 | - | C1H4g19147 | C2H4g20638 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| CX4g035023 | 4:29,402,579-29,403,292 | + | C1H4g27331 | C2H4g26737 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| CX4g032489 | 4:29,405,307-29,408,959 | + | C1H4g25251 | C2H4g18780 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| CX4g035437 | 4:29,410,212-29,412,057 | - | C1H4g10442 | C2H4g23930 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| CX4g031421 | 4:29,413,512-29,416,072 | + | C1H4g01418 | C2H4g04165 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| CX4g034180 | 4:29,421,762-29,421,968 | - | - | C2H4g19726 | LOC_Os04g57260 | - | - | Detail |
| CX4g032599 | 4:29,424,101-29,424,310 | - | - | C2H4g19726 | LOC_Os04g57280 | - | - | Detail |
| CX4g035483 | 4:29,426,392-29,427,654 | + | C1H4g14062 | C2H4g12154 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| CX4g031851 | 4:29,430,488-29,431,942 | - | - | C2H4g10729 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| CX4g033794 | 4:29,434,963-29,438,561 | + | C1H4g07320 | C2H4g24314 | LOC_Os04g57310 | Os04g0668800 | - | Detail |