| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g16412 | 3:8,536,317-8,539,001 | + | C1H3g04825 | CX3g025299 | LOC_Os03g17490 | Os03g0283300 | - | Detail |
| C2H3g25427 | 3:8,540,073-8,542,069 | - | C1H3g31389 | CX3g029292 | LOC_Os03g17500 | Os03g0283400 | - | Detail |
| C2H3g26100 | 3:8,545,546-8,547,342 | - | C1H3g29978 | CX3g030457 | LOC_Os03g17510 | Os03g0283500 | - | Detail |
| C2H3g10500 | 3:8,547,644-8,551,927 | - | C1H3g13527 | CX3g030456 | LOC_Os03g17520 | Os03g0283600 | - | Detail |
| C2H3g23371 | 3:8,562,735-8,570,128 | + | C1H3g19722 | CX3g026672 | LOC_Os03g17540 | Os03g0283800 | - | Detail |
| C2H3g29700 | 3:8,575,417-8,578,781 | - | C1H3g11797 | CX3g029803 | LOC_Os03g17550 | Os03g0283900 | - | Detail |
| C2H3g23379 | 3:8,578,835-8,582,071 | + | C1H3g07283 | CX3g025210 | LOC_Os03g17560 | Os03g0284000 | - | Detail |
| C2H3g10813 | 3:8,582,674-8,591,967 | - | C1H3g27931 | CX3g025348 | LOC_Os03g17570 | Os03g0284100 | OsPRR73, OsCCT11 | Detail |
| C2H3g28337 | 3:8,602,238-8,602,906 | - | C1H3g12560 | CX3g026952 | LOC_Os03g17580 | Os03g0284400 | - | Detail |
| C2H3g30073 | 3:8,604,510-8,608,088 | - | C1H3g02152 | CX3g030728 | LOC_Os03g17590 | Os03g0284500 | - | Detail |
| C2H3g08600 | 3:8,608,868-8,611,833 | + | C1H3g05023 | CX3g026963 | LOC_Os03g17600 | Os03g0284600 | - | Detail |
| C2H3g03614 | 3:8,614,271-8,615,676 | + | C1H3g06994 | CX3g025121 | - | Os03g0284700 | - | Detail |
| C2H3g12259 | 3:8,616,844-8,618,163 | + | C1H3g21431 | CX3g025050 | LOC_Os03g17610 | Os03g0284800 | TOP6A3 | Detail |
| C2H3g11357 | 3:8,618,693-8,632,387 | - | C1H3g26561 | CX3g026635 | LOC_Os03g17634 | Os03g0284900 | - | Detail |
| C2H3g28206 | 3:8,633,086-8,635,359 | + | C1H3g30930 | CX3g031354 | LOC_Os03g17660 | Os03g0285100 | - | Detail |
| C2H3g03876 | 3:8,637,543-8,637,710 | + | C1H3g11566 | CX3g026969 | LOC_Os03g17670 | Os03g0285200 | - | Detail |
| C2H3g05962 | 3:8,641,796-8,641,999 | + | C1H3g09547 | - | LOC_Os03g17680 | Os03g0285300 | - | Detail |
| C2H3g06105 | 3:8,651,135-8,654,478 | + | C1H3g07669 | CX3g026553 | LOC_Os03g17690 | Os03g0285700 | OsAPXa, OsAPX1 | Detail |
| C2H3g17399 | 3:8,655,394-8,658,115 | - | C1H3g30823 | CX3g029338 | LOC_Os03g17700 | Os03g0285800 | - | Detail |
| C2H3g05165 | 3:8,660,950-8,664,020 | - | C1H3g12993 | CX3g029635 | LOC_Os03g17710 | Os03g0285900 | OsRS2Z38 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031479 | 4:29,320,374-29,328,396 | + | C1H4g22979 | C2H4g03747 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g031652 | 4:29,330,751-29,332,200 | + | C1H4g29852 | C2H4g03474 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g032684 | 4:29,332,938-29,338,985 | - | C1H11g04650 | C2H11g00986 | LOC_Os09g01375 | Os04g0206200 | - | Detail |
| CX4g036468 | 4:29,345,983-29,346,782 | - | C1H4g05569 | C2H4g06767 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| CX4g031983 | 4:29,347,872-29,357,065 | - | C1H4g31368 | C2H4g00020 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| CX4g036271 | 4:29,359,343-29,363,348 | + | C1H4g04023 | C2H4g16878 | - | - | - | Detail |
| CX4g034693 | 4:29,364,712-29,368,220 | - | C1H4g07804 | C2H4g30626 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| CX4g034923 | 4:29,369,553-29,369,813 | - | - | - | - | Os04g0667100 | - | Detail |
| CX4g034777 | 4:29,370,019-29,372,335 | + | C1H4g29276 | C2H4g27314 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| CX4g031690 | 4:29,377,848-29,379,277 | - | C1H4g22147 | C2H4g03010 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| CX4g033675 | 4:29,383,386-29,386,045 | - | C1H4g19147 | C2H4g20638 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| CX4g035023 | 4:29,402,579-29,403,292 | + | C1H4g27331 | C2H4g26737 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| CX4g032489 | 4:29,405,307-29,408,959 | + | C1H4g25251 | C2H4g18780 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| CX4g035437 | 4:29,410,212-29,412,057 | - | C1H4g10442 | C2H4g23930 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| CX4g031421 | 4:29,413,512-29,416,072 | + | C1H4g01418 | C2H4g04165 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| CX4g034180 | 4:29,421,762-29,421,968 | - | - | C2H4g19726 | LOC_Os04g57260 | - | - | Detail |
| CX4g032599 | 4:29,424,101-29,424,310 | - | - | C2H4g19726 | LOC_Os04g57280 | - | - | Detail |
| CX4g035483 | 4:29,426,392-29,427,654 | + | C1H4g14062 | C2H4g12154 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| CX4g031851 | 4:29,430,488-29,431,942 | - | - | C2H4g10729 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| CX4g033794 | 4:29,434,963-29,438,561 | + | C1H4g07320 | C2H4g24314 | LOC_Os04g57310 | Os04g0668800 | - | Detail |