| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g19986 | 5:23,348,339-23,348,854 | + | C2H5g11276 | CX5g039972 | LOC_Os05g49620 | Os05g0571200 | OsWRKY19 | Detail |
| C1H5g04002 | 5:23,349,083-23,351,954 | - | C2H5g07321 | CX5g039084 | LOC_Os05g49640 | - | - | Detail |
| C1H5g05630 | 5:23,352,898-23,354,661 | - | C2H5g09536 | CX5g039473 | LOC_Os05g49650 | Os05g0571400 | - | Detail |
| C1H5g23505 | 5:23,355,503-23,359,102 | - | C2H5g14116 | CX5g037409 | LOC_Os05g49680 | Os05g0571700 | - | Detail |
| C1H5g31650 | 5:23,362,863-23,363,681 | - | C2H5g01741 | CX5g038122 | LOC_Os05g49700 | Os05g0572000 | OsRPH1 | Detail |
| C1H5g09233 | 5:23,373,305-23,375,337 | - | C2H5g01004 | CX5g040343 | LOC_Os05g49730 | Os05g0572700 | - | Detail |
| C1H5g26987 | 5:23,383,966-23,386,029 | - | C2H5g20444 | CX5g037759 | LOC_Os05g49740 | Os05g0572900 | - | Detail |
| C1H5g12531 | 5:23,387,390-23,390,584 | - | C2H5g08690 | CX5g039397 | LOC_Os05g49750 | Os05g0573000 | - | Detail |
| C1H5g06006 | 5:23,393,492-23,396,694 | + | C2H5g17652 | CX5g036976 | LOC_Os05g49760 | Os05g0573200 | - | Detail |
| C1H5g18333 | 5:23,396,913-23,403,221 | - | C2H5g07346 | CX5g036857 | LOC_Os05g49770 | Os05g0573300 | - | Detail |
| C1H5g30361 | 5:23,418,717-23,421,879 | + | C2H5g13745 | CX5g039933 | LOC_Os05g49780 | Os05g0573500 | HAP3C, OsHAP3C, OsNF-YB-4, NFYB4 | Detail |
| C1H5g18248 | 5:23,424,184-23,424,597 | - | C2H5g25143 | CX5g040236 | LOC_Os05g49790 | Os05g0573600 | - | Detail |
| C1H5g00854 | 5:23,425,294-23,428,727 | - | C2H5g09568 | CX5g037555 | LOC_Os05g49800 | Os05g0573700 | - | Detail |
| C1H5g11098 | 5:23,431,341-23,434,573 | + | C2H5g07066 | CX5g040047 | LOC_Os05g49810 | Os05g0573800 | - | Detail |
| C1H5g10056 | 5:23,434,882-23,438,835 | - | C2H5g06386 | CX5g037660 | LOC_Os05g49820 | Os05g0573900 | - | Detail |
| C1H5g18130 | 5:23,443,309-23,444,627 | + | C2H5g04324 | CX5g038298 | LOC_Os05g49830 | Os05g0574000 | - | Detail |
| C1H5g18110 | 5:23,444,873-23,448,713 | - | C2H5g11612 | CX5g038739 | LOC_Os05g49840 | Os05g0574100 | - | Detail |
| C1H5g16150 | 5:23,452,828-23,453,286 | + | C2H5g16314 | CX5g037745 | LOC_Os05g49860 | Os05g0574300 | - | Detail |
| C1H5g12972 | 5:23,454,880-23,458,472 | - | C2H5g21858 | CX5g037549 | LOC_Os05g49880 | Os05g0574400 | OsMDH5.1 | Detail |
| C1H5g25768 | 5:23,460,150-23,462,384 | - | C2H5g16147 | CX5g040904 | LOC_Os05g49890 | Os05g0574500 | OsRAN2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g031479 | 4:29,320,374-29,328,396 | + | C1H4g22979 | C2H4g03747 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g031652 | 4:29,330,751-29,332,200 | + | C1H4g29852 | C2H4g03474 | LOC_Os04g57090 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g032684 | 4:29,332,938-29,338,985 | - | C1H11g04650 | C2H11g00986 | LOC_Os09g01375 | Os04g0206200 | - | Detail |
| CX4g036468 | 4:29,345,983-29,346,782 | - | C1H4g05569 | C2H4g06767 | LOC_Os04g57130 | Os04g0666800 | - | Detail |
| CX4g031983 | 4:29,347,872-29,357,065 | - | C1H4g31368 | C2H4g00020 | LOC_Os04g57140 | Os04g0666900 | - | Detail |
| CX4g036271 | 4:29,359,343-29,363,348 | + | C1H4g04023 | C2H4g16878 | - | - | - | Detail |
| CX4g034693 | 4:29,364,712-29,368,220 | - | C1H4g07804 | C2H4g30626 | LOC_Os04g57150 | Os04g0667000 | - | Detail |
| CX4g034923 | 4:29,369,553-29,369,813 | - | - | - | - | Os04g0667100 | - | Detail |
| CX4g034777 | 4:29,370,019-29,372,335 | + | C1H4g29276 | C2H4g27314 | LOC_Os04g57160 | Os04g0667200 | - | Detail |
| CX4g031690 | 4:29,377,848-29,379,277 | - | C1H4g22147 | C2H4g03010 | LOC_Os04g57180 | Os04g0667400 | M2H, 2-ODD 21 | Detail |
| CX4g033675 | 4:29,383,386-29,386,045 | - | C1H4g19147 | C2H4g20638 | LOC_Os04g57190 | Os04g0667500 | - | Detail |
| CX4g035023 | 4:29,402,579-29,403,292 | + | C1H4g27331 | C2H4g26737 | LOC_Os04g57200 | Os04g0667600 | OsHIPP24 | Detail |
| CX4g032489 | 4:29,405,307-29,408,959 | + | C1H4g25251 | C2H4g18780 | LOC_Os04g57210 | Os04g0667700 | - | Detail |
| CX4g035437 | 4:29,410,212-29,412,057 | - | C1H4g10442 | C2H4g23930 | LOC_Os04g57220 | Os04g0667800 | - | Detail |
| CX4g031421 | 4:29,413,512-29,416,072 | + | C1H4g01418 | C2H4g04165 | LOC_Os04g57230 | Os04g0667900 | - | Detail |
| CX4g034180 | 4:29,421,762-29,421,968 | - | - | C2H4g19726 | LOC_Os04g57260 | - | - | Detail |
| CX4g032599 | 4:29,424,101-29,424,310 | - | - | C2H4g19726 | LOC_Os04g57280 | - | - | Detail |
| CX4g035483 | 4:29,426,392-29,427,654 | + | C1H4g14062 | C2H4g12154 | LOC_Os04g57290 | Os04g0668600 | - | Detail |
| CX4g031851 | 4:29,430,488-29,431,942 | - | - | C2H4g10729 | LOC_Os04g57300 | Os04g0668700 | - | Detail |
| CX4g033794 | 4:29,434,963-29,438,561 | + | C1H4g07320 | C2H4g24314 | LOC_Os04g57310 | Os04g0668800 | - | Detail |