| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g22413 | 3:7,356,156-7,357,259 | + | C1H3g11521 | CX3g031275 | LOC_Os03g15270 | Os03g0258200 | - | Detail |
| C2H3g12196 | 3:7,357,307-7,357,537 | - | C1H3g20981 | - | - | - | - | Detail |
| C2H3g23907 | 3:7,364,448-7,369,599 | + | C1H3g24652 | CX3g026336 | LOC_Os03g15290 | Os03g0258500 | ATG6C, OsATG6c, OsATG6b | Detail |
| C2H3g03473 | 3:7,377,137-7,378,828 | + | C1H3g15329 | CX3g028133 | LOC_Os03g15320 | Os03g0258900 | - | Detail |
| C2H3g20701 | 3:7,389,848-7,390,325 | + | C1H3g03982 | CX3g029872 | LOC_Os03g15340 | Os03g0259100 | - | Detail |
| C2H3g11980 | 3:7,391,263-7,398,836 | + | C1H3g01705 | CX3g031115 | LOC_Os03g15350 | Os03g0259300 | - | Detail |
| C2H3g23041 | 3:7,399,174-7,400,622 | - | C1H3g16374 | CX3g028643 | LOC_Os03g15360 | Os03g0259400 | - | Detail |
| C2H3g02482 | 3:7,404,258-7,405,465 | + | C1H3g08146 | CX3g027649 | LOC_Os03g15380 | Os03g0259600 | - | Detail |
| C2H3g06614 | 3:7,410,254-7,413,733 | - | C1H3g29794 | CX3g025462 | LOC_Os03g15390 | Os03g0259700 | - | Detail |
| C2H3g21664 | 3:7,419,004-7,423,187 | + | C1H3g00578 | CX3g026758 | LOC_Os03g15410 | Os03g0259900 | - | Detail |
| C2H3g30516 | 3:7,424,542-7,426,578 | + | C1H3g24107 | CX3g026569 | LOC_Os03g15420 | Os03g0260000 | - | Detail |
| C2H3g29512 | 3:7,427,095-7,431,754 | - | C1H3g10606 | CX3g025990 | LOC_Os03g15430 | Os03g0260100 | - | Detail |
| C2H3g24218 | 3:7,434,681-7,434,941 | - | C1H3g15415 | CX3g025180 | - | Os03g0260432 | - | Detail |
| C2H3g02662 | 3:7,440,817-7,441,305 | - | C1H3g24057 | CX3g027434 | LOC_Os03g11060 | Os03g0209000 | - | Detail |
| C2H3g12059 | 3:7,445,631-7,448,163 | + | C1H3g04803 | CX3g030990 | LOC_Os03g15440 | Os03g0260600 | - | Detail |
| C2H3g02089 | 3:7,461,909-7,463,426 | + | C1H3g25766 | CX3g026582 | - | Os03g0261100 | PLA2-II | Detail |
| C2H3g03272 | 3:7,468,543-7,472,872 | + | C1H3g29084 | CX3g029112 | LOC_Os03g15480 | Os03g0261500 | - | Detail |
| C2H3g15693 | 3:7,485,582-7,486,799 | - | C1H3g27014 | CX3g025214 | LOC_Os03g15530 | Os03g0261800 | - | Detail |
| C2H3g11801 | 3:7,500,010-7,509,476 | - | C1H3g01966 | CX3g031071 | LOC_Os03g15540 | Os03g0261900 | - | Detail |
| C2H3g12029 | 3:7,514,018-7,518,017 | + | C1H3g00077 | CX3g028948 | LOC_Os03g15550 | Os03g0262000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034513 | 4:29,187,979-29,191,413 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56800 | Os04g0663800 | - | Detail |
| CX4g036037 | 4:29,192,753-29,193,226 | + | - | C2H4g24912 | LOC_Os04g56820 | - | - | Detail |
| CX4g035877 | 4:29,195,794-29,196,150 | + | - | C2H4g18884 | - | - | - | Detail |
| CX4g034049 | 4:29,197,082-29,197,396 | - | - | - | LOC_Os04g56840 | Os04g0664300 | - | Detail |
| CX4g033249 | 4:29,199,376-29,204,169 | - | C1H4g18422 | C2H4g20102 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| CX4g034957 | 4:29,226,391-29,227,731 | + | - | C2H4g00899 | LOC_Os04g56900 | Os04g0664500 | OsAHT1 | Detail |
| CX4g035701 | 4:29,229,733-29,231,082 | - | C1H4g12494 | C2H4g19479 | LOC_Os04g56910 | Os04g0664600 | OsAHT2 | Detail |
| CX4g036377 | 4:29,238,240-29,243,723 | - | C1H4g28826 | C2H4g26922 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| CX4g034395 | 4:29,244,425-29,245,093 | + | C1H4g08334 | C2H4g09681 | - | Os04g0665000 | - | Detail |
| CX4g035345 | 4:29,247,413-29,249,374 | - | C1H4g02808 | C2H4g19734 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036239 | 4:29,257,303-29,259,908 | - | C1H4g30864 | C2H4g02593 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| CX4g033681 | 4:29,261,318-29,264,766 | + | C1H4g09343 | C2H4g28957 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| CX4g031794 | 4:29,265,970-29,268,247 | - | C1H4g05828 | C2H4g00001 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| CX4g036304 | 4:29,276,617-29,280,766 | + | C1H4g09596 | C2H4g12242 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| CX4g034037 | 4:29,281,344-29,284,207 | + | C1H4g30725 | C2H4g11326 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| CX4g034903 | 4:29,285,164-29,285,619 | - | - | C2H4g21652 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| CX4g033683 | 4:29,292,832-29,293,396 | + | C1H4g22043 | C2H4g19860 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036428 | 4:29,293,487-29,293,984 | - | - | - | - | - | - | Detail |
| CX4g036202 | 4:29,309,405-29,309,875 | - | - | C2H4g10951 | - | - | - | Detail |
| CX4g033040 | 4:29,317,581-29,319,443 | + | C1H4g22979 | C2H4g15180 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |