| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g04976 | 5:20,737,275-20,738,300 | - | C1H5g01590 | CX5g037904 | LOC_Os05g42100 | Os05g0500400 | - | Detail |
| C2H5g17368 | 5:20,740,815-20,741,114 | - | C1H5g23905 | CX5g039175 | LOC_Os05g42110 | Os05g0500450 | - | Detail |
| C2H5g28908 | 5:20,741,605-20,743,018 | + | C1H5g08894 | CX5g040012 | LOC_Os05g42120 | Os05g0500500 | - | Detail |
| C2H5g15260 | 5:20,745,353-20,746,615 | + | C1H5g00178 | CX5g040288 | LOC_Os05g42130 | Os05g0500600 | - | Detail |
| C2H5g27415 | 5:20,747,139-20,747,840 | + | C1H5g22483 | CX5g039601 | LOC_Os05g42140 | Os05g0500700 | - | Detail |
| C2H5g14428 | 5:20,761,152-20,763,519 | - | C1H5g12028 | CX5g037712 | LOC_Os05g42150 | Os05g0500900 | GH3.4 | Detail |
| C2H5g30517 | 5:20,778,520-20,778,753 | + | C1H5g02940 | CX5g038629 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g05470 | 5:20,778,849-20,779,217 | + | C1H5g11642 | CX5g038629 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g20931 | 5:20,779,285-20,779,712 | + | C1H5g20540 | CX5g040758 | LOC_Os05g42180 | Os05g0501200 | OsbHLH067 | Detail |
| C2H5g14062 | 5:20,784,465-20,787,937 | - | C1H5g28555 | CX5g037320 | LOC_Os05g42190 | Os05g0501300 | - | Detail |
| C2H5g07451 | 5:20,789,735-20,795,475 | + | C1H5g24557 | CX5g040051 | LOC_Os05g42210 | Os05g0501400 | SDRLK-4 | Detail |
| C2H5g07655 | 5:20,799,494-20,802,527 | + | C1H5g06747 | CX5g041088 | LOC_Os05g42220 | Os05g0501600 | - | Detail |
| C2H5g05999 | 5:20,803,642-20,806,401 | + | C1H5g31272 | CX5g040415 | LOC_Os05g42230 | Os05g0501700 | - | Detail |
| C2H5g01142 | 5:20,809,394-20,810,657 | - | C1H5g16795 | CX5g039962 | LOC_Os05g42240 | Os05g0501800 | OsSPL | Detail |
| C2H5g13735 | 5:20,817,548-20,822,179 | + | C1H5g26421 | CX5g038769 | LOC_Os05g42250 | Os05g0502000 | OsCNGC16 | Detail |
| C2H5g18831 | 5:20,828,183-20,830,990 | + | C1H5g17054 | CX5g040519 | LOC_Os05g42270 | Os05g0502200 | - | Detail |
| C2H5g21255 | 5:20,833,484-20,837,130 | - | C1H5g06217 | CX5g040478 | LOC_Os05g42280 | Os05g0502500 | - | Detail |
| C2H5g19742 | 5:20,839,401-20,840,950 | + | C1H5g22762 | CX5g037515 | LOC_Os05g42290 | Os05g0502700 | - | Detail |
| C2H5g01889 | 5:20,843,911-20,847,454 | - | C1H5g20863 | CX5g039451 | LOC_Os05g42300 | Os05g0502800 | - | Detail |
| C2H5g24320 | 5:20,850,709-20,851,170 | + | C1H5g12553 | CX5g038016 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034513 | 4:29,187,979-29,191,413 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56800 | Os04g0663800 | - | Detail |
| CX4g036037 | 4:29,192,753-29,193,226 | + | - | C2H4g24912 | LOC_Os04g56820 | - | - | Detail |
| CX4g035877 | 4:29,195,794-29,196,150 | + | - | C2H4g18884 | - | - | - | Detail |
| CX4g034049 | 4:29,197,082-29,197,396 | - | - | - | LOC_Os04g56840 | Os04g0664300 | - | Detail |
| CX4g033249 | 4:29,199,376-29,204,169 | - | C1H4g18422 | C2H4g20102 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| CX4g034957 | 4:29,226,391-29,227,731 | + | - | C2H4g00899 | LOC_Os04g56900 | Os04g0664500 | OsAHT1 | Detail |
| CX4g035701 | 4:29,229,733-29,231,082 | - | C1H4g12494 | C2H4g19479 | LOC_Os04g56910 | Os04g0664600 | OsAHT2 | Detail |
| CX4g036377 | 4:29,238,240-29,243,723 | - | C1H4g28826 | C2H4g26922 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| CX4g034395 | 4:29,244,425-29,245,093 | + | C1H4g08334 | C2H4g09681 | - | Os04g0665000 | - | Detail |
| CX4g035345 | 4:29,247,413-29,249,374 | - | C1H4g02808 | C2H4g19734 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036239 | 4:29,257,303-29,259,908 | - | C1H4g30864 | C2H4g02593 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| CX4g033681 | 4:29,261,318-29,264,766 | + | C1H4g09343 | C2H4g28957 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| CX4g031794 | 4:29,265,970-29,268,247 | - | C1H4g05828 | C2H4g00001 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| CX4g036304 | 4:29,276,617-29,280,766 | + | C1H4g09596 | C2H4g12242 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| CX4g034037 | 4:29,281,344-29,284,207 | + | C1H4g30725 | C2H4g11326 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| CX4g034903 | 4:29,285,164-29,285,619 | - | - | C2H4g21652 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| CX4g033683 | 4:29,292,832-29,293,396 | + | C1H4g22043 | C2H4g19860 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036428 | 4:29,293,487-29,293,984 | - | - | - | - | - | - | Detail |
| CX4g036202 | 4:29,309,405-29,309,875 | - | - | C2H4g10951 | - | - | - | Detail |
| CX4g033040 | 4:29,317,581-29,319,443 | + | C1H4g22979 | C2H4g15180 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |