| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22126 | 1:10,055,937-10,058,869 | - | C2H1g15223 | - | LOC_Os01g19860 | - | - | Detail |
| C1H1g19979 | 1:10,092,420-10,098,291 | + | C2H1g20818 | CX1g002819 | LOC_Os01g19870 | Os01g0304300 | - | Detail |
| C1H1g14352 | 1:10,113,213-10,116,237 | + | C2H1g11426 | CX1g002390 | LOC_Os01g19940 | Os01g0305200 | - | Detail |
| C1H1g30123 | 1:10,135,115-10,135,381 | + | C2H1g02664 | CX1g004037 | LOC_Os01g19970 | Os01g0305900 | Os2R_MYB7 | Detail |
| C1H1g25851 | 1:10,141,032-10,141,979 | + | C2H1g18264 | CX1g004037 | LOC_Os01g19970 | Os01g0305900 | Os2R_MYB7 | Detail |
| C1H1g22584 | 1:10,149,744-10,150,563 | - | C2H1g03786 | CX1g003842 | LOC_Os01g19990 | Os01g0306100 | - | Detail |
| C1H1g06359 | 1:10,172,725-10,173,641 | + | C2H1g25465 | - | - | - | - | Detail |
| C1H1g06007 | 1:10,181,486-10,190,306 | + | C2H1g16908 | CX1g007219 | LOC_Os01g20110 | Os01g0306800 | - | Detail |
| C1H1g03989 | 1:10,196,755-10,201,815 | - | C2H1g17380 | CX1g002507 | LOC_Os01g20120 | Os01g0306900 | - | Detail |
| C1H1g25307 | 1:10,217,316-10,219,116 | - | C2H1g26747 | CX1g000991 | LOC_Os01g20160 | Os01g0307500 | SKC1, OsHKT1;5 | Detail |
| C1H1g06389 | 1:10,222,837-10,223,976 | - | C2H1g26747 | CX1g000991 | LOC_Os01g20160 | Os01g0307500 | SKC1, OsHKT1;5 | Detail |
| C1H1g23404 | 1:10,249,058-10,253,752 | - | C2H1g25693 | CX1g002251 | - | Os01g0307562 | - | Detail |
| C1H1g16008 | 1:10,258,489-10,259,471 | - | C2H1g30004 | CX1g001704 | LOC_Os01g20206 | Os01g0716500 | - | Detail |
| C1H1g27277 | 1:10,273,571-10,274,475 | + | - | CX1g004085 | - | Os10g0413101 | - | Detail |
| C1H1g09566 | 1:10,323,133-10,324,066 | + | C2H1g12164 | CX1g001078 | LOC_Os01g20830 | Os01g0309800 | - | Detail |
| C1H1g12067 | 1:10,325,896-10,326,435 | - | C2H1g25285 | - | - | Os12g0238400 | - | Detail |
| C1H1g13090 | 1:10,331,679-10,335,439 | + | C2H1g06659 | CX1g001846 | LOC_Os01g20840 | Os01g0309900 | - | Detail |
| C1H1g24589 | 1:10,337,316-10,347,355 | - | C2H1g26562 | CX1g001918 | LOC_Os01g20860 | Os01g0310100 | - | Detail |
| C1H1g24151 | 1:10,380,854-10,384,603 | + | C2H1g17166 | CX1g002504 | LOC_Os01g20880 | Os01g0310500 | - | Detail |
| C1H1g20174 | 1:10,392,477-10,395,242 | + | C2H1g21565 | CX1g002266 | LOC_Os01g20910 | Os01g0311100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034513 | 4:29,187,979-29,191,413 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56800 | Os04g0663800 | - | Detail |
| CX4g036037 | 4:29,192,753-29,193,226 | + | - | C2H4g24912 | LOC_Os04g56820 | - | - | Detail |
| CX4g035877 | 4:29,195,794-29,196,150 | + | - | C2H4g18884 | - | - | - | Detail |
| CX4g034049 | 4:29,197,082-29,197,396 | - | - | - | LOC_Os04g56840 | Os04g0664300 | - | Detail |
| CX4g033249 | 4:29,199,376-29,204,169 | - | C1H4g18422 | C2H4g20102 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| CX4g034957 | 4:29,226,391-29,227,731 | + | - | C2H4g00899 | LOC_Os04g56900 | Os04g0664500 | OsAHT1 | Detail |
| CX4g035701 | 4:29,229,733-29,231,082 | - | C1H4g12494 | C2H4g19479 | LOC_Os04g56910 | Os04g0664600 | OsAHT2 | Detail |
| CX4g036377 | 4:29,238,240-29,243,723 | - | C1H4g28826 | C2H4g26922 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| CX4g034395 | 4:29,244,425-29,245,093 | + | C1H4g08334 | C2H4g09681 | - | Os04g0665000 | - | Detail |
| CX4g035345 | 4:29,247,413-29,249,374 | - | C1H4g02808 | C2H4g19734 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036239 | 4:29,257,303-29,259,908 | - | C1H4g30864 | C2H4g02593 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| CX4g033681 | 4:29,261,318-29,264,766 | + | C1H4g09343 | C2H4g28957 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| CX4g031794 | 4:29,265,970-29,268,247 | - | C1H4g05828 | C2H4g00001 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| CX4g036304 | 4:29,276,617-29,280,766 | + | C1H4g09596 | C2H4g12242 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| CX4g034037 | 4:29,281,344-29,284,207 | + | C1H4g30725 | C2H4g11326 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| CX4g034903 | 4:29,285,164-29,285,619 | - | - | C2H4g21652 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| CX4g033683 | 4:29,292,832-29,293,396 | + | C1H4g22043 | C2H4g19860 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036428 | 4:29,293,487-29,293,984 | - | - | - | - | - | - | Detail |
| CX4g036202 | 4:29,309,405-29,309,875 | - | - | C2H4g10951 | - | - | - | Detail |
| CX4g033040 | 4:29,317,581-29,319,443 | + | C1H4g22979 | C2H4g15180 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |