| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H12g27189 | 12:17,903,901-17,904,173 | - | C2H12g13321 | CX12g017911 | LOC_Os12g36490 | Os12g0551200 | - | Detail |
| C1H12g03214 | 12:17,938,154-17,945,109 | + | C2H12g02214 | CX12g016040 | LOC_Os12g36580 | Os12g0551900 | - | Detail |
| C1H12g00609 | 12:17,988,532-17,999,337 | + | C2H12g13321 | CX12g017911 | LOC_Os12g36340 | Os12g0549800 | - | Detail |
| C1H12g03618 | 12:18,018,088-18,020,312 | + | C2H12g04025 | CX12g016889 | LOC_Os12g36610 | Os12g0552200 | - | Detail |
| C1H12g13279 | 12:18,063,693-18,066,452 | - | C2H12g26461 | CX12g015365 | LOC_Os12g36620 | Os12g0552300 | PPS1 | Detail |
| C1H12g23815 | 12:18,068,060-18,068,720 | - | C2H12g03198 | CX12g016909 | LOC_Os12g36630 | Os12g0552400 | - | Detail |
| C1H12g27529 | 12:18,069,122-18,071,644 | - | C2H12g05175 | CX12g016909 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| C1H12g15786 | 12:18,089,124-18,090,738 | + | C2H12g12611 | CX12g015364 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| C1H12g29275 | 12:18,100,749-18,104,873 | + | C2H12g05930 | CX12g016435 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| C1H12g24562 | 12:18,109,426-18,111,771 | + | C2H12g03052 | CX12g015172 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| C1H12g03146 | 12:18,116,869-18,120,030 | - | C2H12g02154 | CX12g018213 | LOC_Os12g36720 | Os12g0553600 | - | Detail |
| C1H12g00321 | 12:18,121,396-18,122,450 | + | - | - | - | Os12g0553050 | - | Detail |
| C1H12g09573 | 12:18,124,970-18,125,630 | + | - | - | - | Os12g0553050 | - | Detail |
| C1H12g15410 | 12:18,131,304-18,131,816 | - | C2H12g02154 | CX12g018213 | LOC_Os12g36690 | Os12g0552900 | - | Detail |
| C1H12g01930 | 12:18,134,352-18,135,125 | + | C2H12g06633 | CX12g016931 | - | - | - | Detail |
| C1H12g28608 | 12:18,138,385-18,140,552 | + | - | - | - | - | - | Detail |
| C1H12g05813 | 12:18,148,764-18,151,316 | + | C2H12g27584 | - | LOC_Os12g36740 | Os12g0516700 | - | Detail |
| C1H12g04068 | 12:18,153,417-18,156,135 | - | C2H12g15252 | CX12g015515 | LOC_Os12g36750 | Os12g0554100 | - | Detail |
| C1H12g01446 | 12:18,161,089-18,171,130 | - | C2H12g14585 | CX12g016097 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| C1H12g23720 | 12:18,172,596-18,177,138 | - | C2H12g15590 | CX12g016599 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034513 | 4:29,187,979-29,191,413 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56800 | Os04g0663800 | - | Detail |
| CX4g036037 | 4:29,192,753-29,193,226 | + | - | C2H4g24912 | LOC_Os04g56820 | - | - | Detail |
| CX4g035877 | 4:29,195,794-29,196,150 | + | - | C2H4g18884 | - | - | - | Detail |
| CX4g034049 | 4:29,197,082-29,197,396 | - | - | - | LOC_Os04g56840 | Os04g0664300 | - | Detail |
| CX4g033249 | 4:29,199,376-29,204,169 | - | C1H4g18422 | C2H4g20102 | LOC_Os04g56850 | Os04g0664400 | OsARF11, OsMP | Detail |
| CX4g034957 | 4:29,226,391-29,227,731 | + | - | C2H4g00899 | LOC_Os04g56900 | Os04g0664500 | OsAHT1 | Detail |
| CX4g035701 | 4:29,229,733-29,231,082 | - | C1H4g12494 | C2H4g19479 | LOC_Os04g56910 | Os04g0664600 | OsAHT2 | Detail |
| CX4g036377 | 4:29,238,240-29,243,723 | - | C1H4g28826 | C2H4g26922 | LOC_Os04g56920 | Os04g0664800 | - | Detail |
| CX4g034395 | 4:29,244,425-29,245,093 | + | C1H4g08334 | C2H4g09681 | - | Os04g0665000 | - | Detail |
| CX4g035345 | 4:29,247,413-29,249,374 | - | C1H4g02808 | C2H4g19734 | LOC_Os04g56950 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036239 | 4:29,257,303-29,259,908 | - | C1H4g30864 | C2H4g02593 | LOC_Os04g56970 | Os04g0665400 | - | Detail |
| CX4g033681 | 4:29,261,318-29,264,766 | + | C1H4g09343 | C2H4g28957 | LOC_Os04g56980 | Os04g0665500 | - | Detail |
| CX4g031794 | 4:29,265,970-29,268,247 | - | C1H4g05828 | C2H4g00001 | LOC_Os04g56990 | Os04g0665600 | RLI1b | Detail |
| CX4g036304 | 4:29,276,617-29,280,766 | + | C1H4g09596 | C2H4g12242 | LOC_Os04g57010 | Os04g0665700 | - | Detail |
| CX4g034037 | 4:29,281,344-29,284,207 | + | C1H4g30725 | C2H4g11326 | LOC_Os04g57020 | Os04g0665800 | - | Detail |
| CX4g034903 | 4:29,285,164-29,285,619 | - | - | C2H4g21652 | LOC_Os04g57030 | Os04g0665900 | - | Detail |
| CX4g033683 | 4:29,292,832-29,293,396 | + | C1H4g22043 | C2H4g19860 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |
| CX4g036428 | 4:29,293,487-29,293,984 | - | - | - | - | - | - | Detail |
| CX4g036202 | 4:29,309,405-29,309,875 | - | - | C2H4g10951 | - | - | - | Detail |
| CX4g033040 | 4:29,317,581-29,319,443 | + | C1H4g22979 | C2H4g15180 | LOC_Os04g57050 | Os04g0665200 | IAMT1, OsIAMT1, OsSABATH4 | Detail |