| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g24824 | 2:3,441,001-3,443,616 | - | C1H2g22189 | CX2g024836 | LOC_Os02g07670 | Os02g0173000 | - | Detail |
| C2H2g00550 | 2:3,446,779-3,453,230 | + | C1H2g28731 | CX2g022349 | LOC_Os02g07680 | Os02g0173100 | - | Detail |
| C2H2g04564 | 2:3,466,591-3,470,581 | + | C1H2g05749 | CX2g021850 | LOC_Os02g07720 | Os02g0173500 | - | Detail |
| C2H2g25488 | 2:3,473,477-3,474,885 | + | C1H2g20583 | CX2g022008 | LOC_Os02g07730 | Os02g0173600 | - | Detail |
| C2H2g25277 | 2:3,475,547-3,479,727 | + | C1H2g11719 | CX2g022408 | LOC_Os02g07740 | Os02g0173700 | - | Detail |
| C2H2g05358 | 2:3,479,779-3,483,687 | - | C1H2g13144 | CX2g019306 | LOC_Os02g07750 | Os02g0173800 | - | Detail |
| C2H2g15147 | 2:3,485,820-3,493,530 | + | C1H2g30476 | CX2g022443 | LOC_Os02g07760 | Os02g0173900 | - | Detail |
| C2H2g30059 | 2:3,499,284-3,501,532 | - | C1H2g17525 | CX2g021568 | LOC_Os02g07770 | Os02g0174000 | OsAPL | Detail |
| C2H2g18280 | 2:3,514,516-3,518,041 | + | C1H2g14780 | CX2g018842 | LOC_Os02g07780 | Os02g0174100 | - | Detail |
| C2H2g26229 | 2:3,519,233-3,522,261 | - | C1H2g19613 | CX2g023354 | LOC_Os02g07790 | Os02g0174200 | OsDPK2 | Detail |
| C2H2g20308 | 2:3,523,498-3,525,979 | + | C1H2g30350 | CX2g022416 | LOC_Os02g07800 | Os02g0174300 | - | Detail |
| C2H2g01221 | 2:3,526,704-3,529,643 | + | C1H2g08878 | CX2g024880 | LOC_Os02g07810 | Os02g0174400 | - | Detail |
| C2H2g00728 | 2:3,535,527-3,537,625 | + | C1H2g02250 | CX2g023598 | LOC_Os02g07820 | Os02g0174800 | - | Detail |
| C2H2g16638 | 2:3,540,178-3,543,174 | + | C1H2g14484 | CX2g023627 | LOC_Os02g07830 | Os02g0175000 | HKT6, OsHKT6, OsHKT1;3 | Detail |
| C2H2g09018 | 2:3,548,013-3,550,777 | + | C1H2g18593 | CX2g020712 | LOC_Os02g07840 | Os02g0175100 | RISBZ4 | Detail |
| C2H2g04831 | 2:3,551,235-3,554,184 | - | C1H2g09443 | CX2g023186 | LOC_Os02g07850 | Os02g0175200 | - | Detail |
| C2H2g15931 | 2:3,560,500-3,567,958 | + | C1H2g02033 | CX2g019528 | LOC_Os02g07870 | Os02g0175400 | - | Detail |
| C2H2g27332 | 2:3,569,517-3,574,214 | + | - | - | - | - | - | Detail |
| C2H2g23705 | 2:3,579,835-3,583,643 | - | C1H2g07080 | CX2g019494 | LOC_Os02g07900 | Os02g0175700 | OsANTH3 | Detail |
| C2H2g17525 | 2:3,584,868-3,586,687 | + | C1H2g29388 | CX2g023593 | LOC_Os02g07910 | Os02g0175800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035527 | 4:29,072,526-29,080,033 | - | C1H4g05764 | C2H4g30358 | LOC_Os04g56630 | Os04g0661700 | - | Detail |
| CX4g036335 | 4:29,081,648-29,082,831 | - | C1H4g15510 | C2H4g15418 | LOC_Os04g56640 | Os04g0661800 | - | Detail |
| CX4g035742 | 4:29,084,637-29,087,798 | + | C1H4g17837 | C2H4g25643 | LOC_Os04g56646 | Os04g0661900 | - | Detail |
| CX4g035185 | 4:29,089,251-29,090,372 | + | C1H4g07157 | C2H4g06604 | LOC_Os04g56654 | - | - | Detail |
| CX4g035521 | 4:29,091,153-29,092,913 | - | C1H4g06952 | C2H4g27865 | LOC_Os04g56670 | Os04g0662100 | - | Detail |
| CX4g033481 | 4:29,096,690-29,097,127 | - | - | C2H4g20023 | LOC_Os04g56680 | Os04g0662200 | - | Detail |
| CX4g032981 | 4:29,110,880-29,111,347 | - | - | C2H4g12369 | LOC_Os04g56690 | Os04g0662400 | - | Detail |
| CX4g032334 | 4:29,112,603-29,112,755 | + | - | - | - | Os01g0728000 | - | Detail |
| CX4g032460 | 4:29,115,919-29,119,044 | - | C1H4g20842 | C2H4g27508 | LOC_Os04g56700 | Os04g0662600 | F3H | Detail |
| CX4g034138 | 4:29,120,821-29,124,698 | - | C1H4g09059 | C2H4g17303 | LOC_Os04g56710 | Os04g0662700 | - | Detail |
| CX4g034339 | 4:29,127,077-29,132,897 | + | C1H4g13098 | C2H4g16716 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| CX4g033445 | 4:29,133,803-29,135,764 | - | C1H4g29894 | C2H4g14267 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| CX4g032392 | 4:29,149,047-29,149,211 | - | - | - | - | - | - | Detail |
| CX4g032535 | 4:29,152,755-29,157,470 | + | C1H4g08308 | C2H4g26679 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| CX4g033028 | 4:29,162,158-29,167,120 | - | C1H4g00285 | C2H4g19453 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| CX4g031937 | 4:29,168,442-29,168,774 | - | C1H5g05278 | C2H4g17808 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| CX4g034501 | 4:29,170,056-29,170,310 | + | C1H4g10605 | C2H4g23478 | - | - | - | Detail |
| CX4g032009 | 4:29,170,361-29,172,471 | + | C1H4g18316 | C2H4g29870 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| CX4g035961 | 4:29,174,580-29,175,652 | - | C1H4g08413 | C2H4g27682 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| CX4g034853 | 4:29,183,936-29,187,241 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56790 | Os04g0663700 | - | Detail |