| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g23911 | 5:22,286,210-22,288,992 | + | C2H5g14920 | CX5g039498 | LOC_Os05g47630 | Os05g0549600 | - | Detail |
| C1H5g02487 | 5:22,293,467-22,295,011 | + | C2H5g22501 | CX5g038154 | LOC_Os05g47640 | Os05g0549700 | - | Detail |
| C1H5g09801 | 5:22,312,224-22,313,390 | + | C2H5g14796 | CX5g037227 | LOC_Os05g47650 | Os05g0549800 | OsRAV12 | Detail |
| C1H5g13048 | 5:22,320,075-22,322,734 | - | C2H5g00683 | CX5g038879 | LOC_Os05g47660 | Os05g0549900 | - | Detail |
| C1H5g31388 | 5:22,322,774-22,323,282 | - | C2H5g14326 | CX5g038879 | LOC_Os05g47660 | Os05g0549900 | - | Detail |
| C1H5g29449 | 5:22,327,059-22,329,803 | + | C2H5g06469 | CX5g038362 | LOC_Os05g47670 | Os05g0550000 | - | Detail |
| C1H5g11690 | 5:22,330,129-22,332,480 | - | C2H5g21681 | CX5g039534 | LOC_Os05g47680 | Os05g0550100 | - | Detail |
| C1H5g16547 | 5:22,333,302-22,334,688 | - | C2H5g26670 | CX5g037514 | LOC_Os05g47690 | Os05g0550250 | - | Detail |
| C1H5g30856 | 5:22,336,934-22,337,224 | + | C2H5g18660 | CX5g038208 | LOC_Os05g47700 | Os05g0550300 | - | Detail |
| C1H5g29709 | 5:22,341,103-22,341,393 | + | C2H5g15027 | CX5g038446 | LOC_Os05g47730 | Os05g0550600 | - | Detail |
| C1H5g12523 | 5:22,341,748-22,345,902 | - | C2H5g25369 | CX5g038507 | LOC_Os05g47750 | Os05g0550700 | - | Detail |
| C1H5g30779 | 5:22,347,968-22,348,699 | - | C2H5g25369 | CX5g038507 | LOC_Os05g47750 | Os05g0550800 | - | Detail |
| C1H5g14447 | 5:22,351,742-22,352,791 | + | C2H5g08122 | CX5g037911 | LOC_Os05g47770 | Os05g0550800 | - | Detail |
| C1H5g23339 | 5:22,354,659-22,358,563 | + | C2H5g16301 | CX5g037911 | LOC_Os05g47770 | Os05g0550800 | - | Detail |
| C1H5g00731 | 5:22,362,672-22,371,372 | + | C2H5g06502 | CX5g040704 | LOC_Os05g47780 | Os05g0551000 | OsHRZ2, CLG1 | Detail |
| C1H5g06873 | 5:22,372,392-22,376,533 | - | C2H5g08056 | CX5g039561 | LOC_Os05g47790 | Os05g0551100 | - | Detail |
| C1H5g13696 | 5:22,392,268-22,393,261 | - | C2H5g20234 | CX5g039374 | LOC_Os05g47810 | Os05g0551350 | - | Detail |
| C1H5g06625 | 5:22,398,367-22,399,211 | - | C2H5g13179 | CX5g037243 | LOC_Os05g47820 | Os05g0551500 | - | Detail |
| C1H5g23725 | 5:22,403,041-22,403,838 | + | C2H5g14649 | CX5g038884 | LOC_Os05g47830 | Os05g0551600 | - | Detail |
| C1H5g04420 | 5:22,408,482-22,409,567 | - | C2H5g30187 | CX5g038373 | LOC_Os05g47840 | Os05g0551700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035527 | 4:29,072,526-29,080,033 | - | C1H4g05764 | C2H4g30358 | LOC_Os04g56630 | Os04g0661700 | - | Detail |
| CX4g036335 | 4:29,081,648-29,082,831 | - | C1H4g15510 | C2H4g15418 | LOC_Os04g56640 | Os04g0661800 | - | Detail |
| CX4g035742 | 4:29,084,637-29,087,798 | + | C1H4g17837 | C2H4g25643 | LOC_Os04g56646 | Os04g0661900 | - | Detail |
| CX4g035185 | 4:29,089,251-29,090,372 | + | C1H4g07157 | C2H4g06604 | LOC_Os04g56654 | - | - | Detail |
| CX4g035521 | 4:29,091,153-29,092,913 | - | C1H4g06952 | C2H4g27865 | LOC_Os04g56670 | Os04g0662100 | - | Detail |
| CX4g033481 | 4:29,096,690-29,097,127 | - | - | C2H4g20023 | LOC_Os04g56680 | Os04g0662200 | - | Detail |
| CX4g032981 | 4:29,110,880-29,111,347 | - | - | C2H4g12369 | LOC_Os04g56690 | Os04g0662400 | - | Detail |
| CX4g032334 | 4:29,112,603-29,112,755 | + | - | - | - | Os01g0728000 | - | Detail |
| CX4g032460 | 4:29,115,919-29,119,044 | - | C1H4g20842 | C2H4g27508 | LOC_Os04g56700 | Os04g0662600 | F3H | Detail |
| CX4g034138 | 4:29,120,821-29,124,698 | - | C1H4g09059 | C2H4g17303 | LOC_Os04g56710 | Os04g0662700 | - | Detail |
| CX4g034339 | 4:29,127,077-29,132,897 | + | C1H4g13098 | C2H4g16716 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| CX4g033445 | 4:29,133,803-29,135,764 | - | C1H4g29894 | C2H4g14267 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| CX4g032392 | 4:29,149,047-29,149,211 | - | - | - | - | - | - | Detail |
| CX4g032535 | 4:29,152,755-29,157,470 | + | C1H4g08308 | C2H4g26679 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| CX4g033028 | 4:29,162,158-29,167,120 | - | C1H4g00285 | C2H4g19453 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| CX4g031937 | 4:29,168,442-29,168,774 | - | C1H5g05278 | C2H4g17808 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| CX4g034501 | 4:29,170,056-29,170,310 | + | C1H4g10605 | C2H4g23478 | - | - | - | Detail |
| CX4g032009 | 4:29,170,361-29,172,471 | + | C1H4g18316 | C2H4g29870 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| CX4g035961 | 4:29,174,580-29,175,652 | - | C1H4g08413 | C2H4g27682 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| CX4g034853 | 4:29,183,936-29,187,241 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56790 | Os04g0663700 | - | Detail |