| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g19227 | 3:24,541,799-24,542,739 | + | C2H3g29200 | CX3g028453 | LOC_Os03g46250 | Os03g0665000 | - | Detail |
| C1H3g03624 | 3:24,544,753-24,548,049 | - | C2H3g13481 | CX3g028439 | LOC_Os03g46260 | Os03g0665200 | OsFLZ11 | Detail |
| C1H3g02596 | 3:24,581,068-24,583,172 | + | C2H3g02010 | CX3g030454 | LOC_Os03g46310 | Os03g0665800 | - | Detail |
| C1H3g06192 | 3:24,588,766-24,595,789 | + | C2H3g24958 | CX3g030422 | LOC_Os03g46330 | Os03g0666100 | - | Detail |
| C1H3g26270 | 3:24,595,871-24,599,723 | - | C2H3g06923 | CX3g025831 | LOC_Os03g46340 | Os03g0666200 | OsSWAP70A | Detail |
| C1H3g10336 | 3:24,604,882-24,606,004 | + | C2H3g08439 | CX3g029931 | LOC_Os03g46350 | Os03g0666300 | - | Detail |
| C1H3g03788 | 3:24,615,395-24,621,631 | + | C2H3g02623 | CX3g027340 | LOC_Os03g46390 | Os03g0666500 | - | Detail |
| C1H3g03865 | 3:24,622,250-24,624,847 | - | C2H3g22843 | CX3g026425 | LOC_Os03g46410 | Os03g0666700 | - | Detail |
| C1H3g13561 | 3:24,635,082-24,638,710 | - | C2H3g09706 | CX3g026086 | LOC_Os03g46440 | Os03g0667100 | - | Detail |
| C1H3g09851 | 3:24,649,516-24,650,720 | - | C2H3g16749 | CX3g030979 | LOC_Os03g46454 | Os03g0667300 | OsIRT2 | Detail |
| C1H3g21913 | 3:24,658,354-24,663,164 | - | C2H3g11751 | CX3g025528 | LOC_Os03g46470 | Os03g0667500 | OsIRT1 | Detail |
| C1H3g14101 | 3:24,664,905-24,670,128 | - | C2H3g12375 | CX3g026005 | LOC_Os03g46480 | Os03g0667700 | - | Detail |
| C1H3g27711 | 3:24,685,670-24,687,138 | + | C2H3g21545 | CX3g025010 | LOC_Os03g46510 | Os03g0668000 | - | Detail |
| C1H3g30467 | 3:24,698,335-24,700,897 | + | C2H3g00299 | CX3g030801 | LOC_Os03g46530 | Os03g0668000 | - | Detail |
| C1H3g14274 | 3:24,708,451-24,712,953 | + | C2H3g13344 | CX3g030508 | LOC_Os03g46550 | Os03g0668300 | - | Detail |
| C1H3g19376 | 3:24,738,081-24,739,277 | + | C2H3g18832 | CX3g026468 | LOC_Os03g46570 | Os03g0668500 | - | Detail |
| C1H3g28696 | 3:24,747,849-24,749,741 | + | C2H3g11477 | CX3g026071 | LOC_Os03g46600 | Os03g0668900 | - | Detail |
| C1H3g23346 | 3:24,750,627-24,757,311 | - | C2H3g10479 | CX3g026665 | LOC_Os03g46610 | Os03g0669000 | - | Detail |
| C1H3g28193 | 3:24,764,468-24,765,166 | - | C2H3g24036 | CX3g029802 | LOC_Os03g46640 | Os03g0669100 | - | Detail |
| C1H3g02699 | 3:24,766,768-24,774,683 | - | C2H3g13024 | CX3g029587 | LOC_Os03g46650 | Os03g0669200 | OsWD40-80, RGbeta1, RGB1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035527 | 4:29,072,526-29,080,033 | - | C1H4g05764 | C2H4g30358 | LOC_Os04g56630 | Os04g0661700 | - | Detail |
| CX4g036335 | 4:29,081,648-29,082,831 | - | C1H4g15510 | C2H4g15418 | LOC_Os04g56640 | Os04g0661800 | - | Detail |
| CX4g035742 | 4:29,084,637-29,087,798 | + | C1H4g17837 | C2H4g25643 | LOC_Os04g56646 | Os04g0661900 | - | Detail |
| CX4g035185 | 4:29,089,251-29,090,372 | + | C1H4g07157 | C2H4g06604 | LOC_Os04g56654 | - | - | Detail |
| CX4g035521 | 4:29,091,153-29,092,913 | - | C1H4g06952 | C2H4g27865 | LOC_Os04g56670 | Os04g0662100 | - | Detail |
| CX4g033481 | 4:29,096,690-29,097,127 | - | - | C2H4g20023 | LOC_Os04g56680 | Os04g0662200 | - | Detail |
| CX4g032981 | 4:29,110,880-29,111,347 | - | - | C2H4g12369 | LOC_Os04g56690 | Os04g0662400 | - | Detail |
| CX4g032334 | 4:29,112,603-29,112,755 | + | - | - | - | Os01g0728000 | - | Detail |
| CX4g032460 | 4:29,115,919-29,119,044 | - | C1H4g20842 | C2H4g27508 | LOC_Os04g56700 | Os04g0662600 | F3H | Detail |
| CX4g034138 | 4:29,120,821-29,124,698 | - | C1H4g09059 | C2H4g17303 | LOC_Os04g56710 | Os04g0662700 | - | Detail |
| CX4g034339 | 4:29,127,077-29,132,897 | + | C1H4g13098 | C2H4g16716 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| CX4g033445 | 4:29,133,803-29,135,764 | - | C1H4g29894 | C2H4g14267 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| CX4g032392 | 4:29,149,047-29,149,211 | - | - | - | - | - | - | Detail |
| CX4g032535 | 4:29,152,755-29,157,470 | + | C1H4g08308 | C2H4g26679 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| CX4g033028 | 4:29,162,158-29,167,120 | - | C1H4g00285 | C2H4g19453 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| CX4g031937 | 4:29,168,442-29,168,774 | - | C1H5g05278 | C2H4g17808 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| CX4g034501 | 4:29,170,056-29,170,310 | + | C1H4g10605 | C2H4g23478 | - | - | - | Detail |
| CX4g032009 | 4:29,170,361-29,172,471 | + | C1H4g18316 | C2H4g29870 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| CX4g035961 | 4:29,174,580-29,175,652 | - | C1H4g08413 | C2H4g27682 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| CX4g034853 | 4:29,183,936-29,187,241 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56790 | Os04g0663700 | - | Detail |