| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g24262 | 11:5,400,537-5,404,142 | + | C2H11g21830 | CX11g010984 | LOC_Os11g11050 | Os11g0216900 | - | Detail |
| C1H11g14975 | 11:5,407,160-5,410,900 | + | C2H11g04131 | CX11g011551 | LOC_Os11g11060 | Os11g0217300 | - | Detail |
| C1H11g27825 | 11:5,412,109-5,413,855 | + | C2H11g25919 | CX11g014847 | LOC_Os04g53150 | Os11g0440422 | - | Detail |
| C1H11g00462 | 11:5,414,189-5,426,967 | - | C2H11g08951 | CX11g013092 | LOC_Os11g11070 | Os11g0217500 | - | Detail |
| C1H11g18670 | 11:5,450,003-5,453,568 | + | C2H11g22387 | CX11g012257 | LOC_Os11g11100 | Os11g0218000 | - | Detail |
| C1H11g15242 | 11:5,453,997-5,455,799 | - | C2H11g03822 | - | LOC_Os11g11110 | Os11g0218100 | - | Detail |
| C1H11g04937 | 11:5,456,688-5,456,951 | - | C2H11g14408 | CX11g014970 | LOC_Os11g11130 | Os11g0218200 | - | Detail |
| C1H11g30632 | 11:5,476,081-5,479,788 | - | C2H11g20420 | CX11g011042 | LOC_Os11g11210 | Os11g0219000 | - | Detail |
| C1H11g03533 | 11:5,483,269-5,484,215 | - | C2H11g24668 | - | - | - | - | Detail |
| C1H11g27077 | 11:5,491,353-5,491,571 | + | C2H11g30400 | - | - | - | - | Detail |
| C1H11g15197 | 11:5,513,386-5,514,206 | - | C2H11g14681 | CX11g012368 | LOC_Os11g11330 | Os11g0220300 | - | Detail |
| C1H11g16930 | 11:5,515,220-5,521,069 | + | C2H11g21831 | CX11g011557 | LOC_Os11g11340 | Os11g0220400 | - | Detail |
| C1H11g24609 | 11:5,522,835-5,524,524 | - | C2H11g02437 | CX11g013771 | LOC_Os11g11350 | Os11g0220500 | - | Detail |
| C1H11g23791 | 11:5,526,426-5,527,712 | - | C2H11g02437 | CX11g013771 | LOC_Os11g11350 | Os11g0220500 | - | Detail |
| C1H11g09589 | 11:5,529,977-5,530,510 | - | C2H11g02437 | CX11g013771 | LOC_Os11g11360 | Os11g0220600 | - | Detail |
| C1H11g18073 | 11:5,531,695-5,533,668 | + | C2H11g30280 | - | LOC_Os11g11370 | Os11g0220700 | - | Detail |
| C1H11g14933 | 11:5,541,682-5,544,031 | + | C2H11g25654 | CX11g012198 | LOC_Os11g11390 | Os11g0220800 | - | Detail |
| C1H11g26789 | 11:5,558,057-5,561,688 | + | C2H11g01265 | CX11g014259 | LOC_Os11g11410 | Os11g0221000 | - | Detail |
| C1H11g06465 | 11:5,561,771-5,565,628 | + | C2H11g17271 | CX11g014259 | LOC_Os11g11410 | Os11g0221000 | - | Detail |
| C1H11g10310 | 11:5,570,158-5,571,470 | + | C2H11g11075 | CX11g011374 | LOC_Os11g11420 | Os11g0221200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035527 | 4:29,072,526-29,080,033 | - | C1H4g05764 | C2H4g30358 | LOC_Os04g56630 | Os04g0661700 | - | Detail |
| CX4g036335 | 4:29,081,648-29,082,831 | - | C1H4g15510 | C2H4g15418 | LOC_Os04g56640 | Os04g0661800 | - | Detail |
| CX4g035742 | 4:29,084,637-29,087,798 | + | C1H4g17837 | C2H4g25643 | LOC_Os04g56646 | Os04g0661900 | - | Detail |
| CX4g035185 | 4:29,089,251-29,090,372 | + | C1H4g07157 | C2H4g06604 | LOC_Os04g56654 | - | - | Detail |
| CX4g035521 | 4:29,091,153-29,092,913 | - | C1H4g06952 | C2H4g27865 | LOC_Os04g56670 | Os04g0662100 | - | Detail |
| CX4g033481 | 4:29,096,690-29,097,127 | - | - | C2H4g20023 | LOC_Os04g56680 | Os04g0662200 | - | Detail |
| CX4g032981 | 4:29,110,880-29,111,347 | - | - | C2H4g12369 | LOC_Os04g56690 | Os04g0662400 | - | Detail |
| CX4g032334 | 4:29,112,603-29,112,755 | + | - | - | - | Os01g0728000 | - | Detail |
| CX4g032460 | 4:29,115,919-29,119,044 | - | C1H4g20842 | C2H4g27508 | LOC_Os04g56700 | Os04g0662600 | F3H | Detail |
| CX4g034138 | 4:29,120,821-29,124,698 | - | C1H4g09059 | C2H4g17303 | LOC_Os04g56710 | Os04g0662700 | - | Detail |
| CX4g034339 | 4:29,127,077-29,132,897 | + | C1H4g13098 | C2H4g16716 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| CX4g033445 | 4:29,133,803-29,135,764 | - | C1H4g29894 | C2H4g14267 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| CX4g032392 | 4:29,149,047-29,149,211 | - | - | - | - | - | - | Detail |
| CX4g032535 | 4:29,152,755-29,157,470 | + | C1H4g08308 | C2H4g26679 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| CX4g033028 | 4:29,162,158-29,167,120 | - | C1H4g00285 | C2H4g19453 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| CX4g031937 | 4:29,168,442-29,168,774 | - | C1H5g05278 | C2H4g17808 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| CX4g034501 | 4:29,170,056-29,170,310 | + | C1H4g10605 | C2H4g23478 | - | - | - | Detail |
| CX4g032009 | 4:29,170,361-29,172,471 | + | C1H4g18316 | C2H4g29870 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| CX4g035961 | 4:29,174,580-29,175,652 | - | C1H4g08413 | C2H4g27682 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| CX4g034853 | 4:29,183,936-29,187,241 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56790 | Os04g0663700 | - | Detail |