| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g15651 | 6:1,495,958-1,500,277 | + | C2H6g11346 | CX6g042092 | LOC_Os06g04640 | Os06g0138000 | - | Detail |
| C1H6g27478 | 6:1,500,988-1,502,699 | - | C2H6g15488 | CX6g043067 | LOC_Os06g04650 | Os06g0138100 | - | Detail |
| C1H6g25263 | 6:1,503,059-1,507,308 | + | C2H6g16932 | CX6g041227 | LOC_Os06g04660 | Os06g0138200 | - | Detail |
| C1H6g22039 | 6:1,514,705-1,515,718 | + | C2H6g00635 | CX6g044072 | LOC_Os06g04670 | Os06g0138400 | - | Detail |
| C1H6g02705 | 6:1,525,699-1,526,578 | + | C2H6g23253 | CX6g044076 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| C1H6g05873 | 6:1,528,403-1,529,467 | + | C2H6g07231 | - | LOC_Os06g04734 | Os06g0138900 | - | Detail |
| C1H6g03863 | 6:1,531,234-1,536,270 | - | C2H6g10016 | CX6g042246 | LOC_Os06g04710 | Os06g0139000 | DDF1 | Detail |
| C1H6g19963 | 6:1,542,923-1,543,614 | + | C2H6g03556 | - | LOC_Os06g04760 | - | - | Detail |
| C1H6g18760 | 6:1,545,974-1,548,358 | + | C2H6g10420 | CX6g044076 | LOC_Os06g04780 | Os06g0139700 | - | Detail |
| C1H6g11816 | 6:1,550,302-1,552,325 | + | C2H6g16226 | CX6g044405 | LOC_Os06g04790 | Os06g0139800 | - | Detail |
| C1H6g26349 | 6:1,552,786-1,556,109 | - | C2H6g23209 | CX6g045953 | LOC_Os06g04800 | Os06g0139900 | - | Detail |
| C1H6g08381 | 6:1,561,828-1,566,879 | - | C2H6g14757 | - | LOC_Os06g04820 | Os06g0140100 | spd6 | Detail |
| C1H6g12632 | 6:1,579,044-1,579,926 | + | C2H6g11310 | CX6g045336 | LOC_Os06g04850 | Os06g0140400 | - | Detail |
| C1H6g28945 | 6:1,593,268-1,594,305 | + | C2H6g12351 | CX6g042238 | LOC_Os06g04870 | Os06g0140700 | - | Detail |
| C1H6g16218 | 6:1,595,577-1,602,009 | - | C2H6g07431 | CX6g041483 | LOC_Os06g04880 | Os06g0140800 | - | Detail |
| C1H6g10901 | 6:1,610,759-1,612,398 | - | C2H6g06281 | CX6g042963 | LOC_Os06g04900 | Os06g0141100 | OsSTP19 | Detail |
| C1H6g22682 | 6:1,613,201-1,616,302 | - | C2H6g22276 | CX6g042744 | LOC_Os06g04910 | Os06g0141166 | - | Detail |
| C1H6g07568 | 6:1,618,763-1,620,011 | - | C2H6g22440 | CX6g044396 | LOC_Os06g04920 | Os06g0141200 | OsZFP1 | Detail |
| C1H6g14984 | 6:1,627,056-1,627,835 | - | C2H6g06397 | - | LOC_Os06g04990 | Os06g0141400 | - | Detail |
| C1H6g03765 | 6:1,627,949-1,629,205 | - | - | - | - | Os06g0141400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g035527 | 4:29,072,526-29,080,033 | - | C1H4g05764 | C2H4g30358 | LOC_Os04g56630 | Os04g0661700 | - | Detail |
| CX4g036335 | 4:29,081,648-29,082,831 | - | C1H4g15510 | C2H4g15418 | LOC_Os04g56640 | Os04g0661800 | - | Detail |
| CX4g035742 | 4:29,084,637-29,087,798 | + | C1H4g17837 | C2H4g25643 | LOC_Os04g56646 | Os04g0661900 | - | Detail |
| CX4g035185 | 4:29,089,251-29,090,372 | + | C1H4g07157 | C2H4g06604 | LOC_Os04g56654 | - | - | Detail |
| CX4g035521 | 4:29,091,153-29,092,913 | - | C1H4g06952 | C2H4g27865 | LOC_Os04g56670 | Os04g0662100 | - | Detail |
| CX4g033481 | 4:29,096,690-29,097,127 | - | - | C2H4g20023 | LOC_Os04g56680 | Os04g0662200 | - | Detail |
| CX4g032981 | 4:29,110,880-29,111,347 | - | - | C2H4g12369 | LOC_Os04g56690 | Os04g0662400 | - | Detail |
| CX4g032334 | 4:29,112,603-29,112,755 | + | - | - | - | Os01g0728000 | - | Detail |
| CX4g032460 | 4:29,115,919-29,119,044 | - | C1H4g20842 | C2H4g27508 | LOC_Os04g56700 | Os04g0662600 | F3H | Detail |
| CX4g034138 | 4:29,120,821-29,124,698 | - | C1H4g09059 | C2H4g17303 | LOC_Os04g56710 | Os04g0662700 | - | Detail |
| CX4g034339 | 4:29,127,077-29,132,897 | + | C1H4g13098 | C2H4g16716 | LOC_Os04g56720 | Os04g0662800 | - | Detail |
| CX4g033445 | 4:29,133,803-29,135,764 | - | C1H4g29894 | C2H4g14267 | LOC_Os04g56730 | Os04g0662900 | - | Detail |
| CX4g032392 | 4:29,149,047-29,149,211 | - | - | - | - | - | - | Detail |
| CX4g032535 | 4:29,152,755-29,157,470 | + | C1H4g08308 | C2H4g26679 | LOC_Os04g56740 | Os04g0663100 | - | Detail |
| CX4g033028 | 4:29,162,158-29,167,120 | - | C1H4g00285 | C2H4g19453 | LOC_Os04g56750 | Os04g0663200 | - | Detail |
| CX4g031937 | 4:29,168,442-29,168,774 | - | C1H5g05278 | C2H4g17808 | LOC_Os04g56760 | Os04g0663300 | OsPHF5A1 | Detail |
| CX4g034501 | 4:29,170,056-29,170,310 | + | C1H4g10605 | C2H4g23478 | - | - | - | Detail |
| CX4g032009 | 4:29,170,361-29,172,471 | + | C1H4g18316 | C2H4g29870 | LOC_Os04g56770 | Os04g0663500 | - | Detail |
| CX4g035961 | 4:29,174,580-29,175,652 | - | C1H4g08413 | C2H4g27682 | LOC_Os04g56780 | Os04g0663600 | WOX1, Os WUS, WUS, OsWOX1, OsWUS, TAB1, TAB1/WUS, MOC3, MOC3/OsWUS | Detail |
| CX4g034853 | 4:29,183,936-29,187,241 | - | C1H4g06808 | C2H4g25028 | LOC_Os04g56790 | Os04g0663700 | - | Detail |