| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g03604 | 5:22,424,868-22,433,256 | - | C1H5g08208 | CX5g039402 | LOC_Os05g46200 | Os05g0539400 | OsBGAL9 | Detail |
| C2H5g03462 | 5:22,433,454-22,437,384 | + | C1H5g30453 | CX5g037335 | LOC_Os05g46210 | Os05g0539500 | - | Detail |
| C2H5g14490 | 5:22,437,724-22,440,739 | + | C1H5g05923 | CX5g038955 | LOC_Os05g46220 | Os05g0539600 | - | Detail |
| C2H5g27574 | 5:22,441,580-22,444,438 | - | C1H5g24903 | CX5g040683 | LOC_Os05g46230 | Os05g0539700 | - | Detail |
| C2H5g03274 | 5:22,448,233-22,449,492 | - | C1H5g09340 | CX5g040385 | LOC_Os05g46240 | Os05g0539800 | - | Detail |
| C2H5g20087 | 5:22,453,600-22,456,005 | + | C1H5g27591 | CX5g040129 | LOC_Os05g46250 | Os05g0539900 | - | Detail |
| C2H5g21500 | 5:22,457,514-22,461,443 | + | C1H5g14200 | CX5g039216 | LOC_Os05g46260 | Os05g0540000 | OsFSE6, OsGINT1 | Detail |
| C2H5g13866 | 5:22,461,480-22,463,096 | - | C1H5g12849 | CX5g040191 | LOC_Os05g46310 | Os05g0536800 | - | Detail |
| C2H5g29925 | 5:22,463,688-22,467,754 | - | C1H5g10025 | - | LOC_Os05g46270 | Os05g0540100 | - | Detail |
| C2H5g01666 | 5:22,467,948-22,468,754 | + | C1H5g28338 | - | LOC_Os05g46280 | Os05g0540200 | - | Detail |
| C2H5g04565 | 5:22,469,115-22,473,763 | - | C1H5g11949 | - | LOC_Os05g46290 | Os05g0540300 | - | Detail |
| C2H5g24441 | 5:22,481,164-22,482,648 | - | C1H5g25265 | CX5g040191 | LOC_Os05g46320 | Os05g0540600 | - | Detail |
| C2H5g25396 | 5:22,484,706-22,491,980 | + | C1H5g01480 | CX5g041012 | LOC_Os05g46330 | Os05g0540800 | - | Detail |
| C2H5g16790 | 5:22,493,325-22,494,446 | - | C1H5g24700 | CX5g036866 | LOC_Os05g46340 | Os05g0540900 | - | Detail |
| C2H5g11235 | 5:22,498,564-22,501,257 | + | C1H5g20535 | CX5g037419 | LOC_Os05g46350 | Os05g0541100 | - | Detail |
| C2H5g11661 | 5:22,504,135-22,506,002 | + | C1H5g03970 | CX5g037625 | LOC_Os05g46360 | Os05g0541200 | - | Detail |
| C2H5g14117 | 5:22,514,404-22,515,642 | + | C1H5g12775 | CX5g036893 | LOC_Os05g46370 | Os05g0541400 | OsLF | Detail |
| C2H5g27978 | 5:22,520,273-22,522,828 | + | C1H5g21489 | CX5g040191 | LOC_Os05g46380 | Os05g0540600 | - | Detail |
| C2H5g13798 | 5:22,530,592-22,535,795 | + | C1H5g06562 | CX5g039412 | LOC_Os05g46395 | Os05g0541700 | - | Detail |
| C2H5g16362 | 5:22,537,639-22,537,830 | - | C1H5g30366 | CX5g039337 | - | Os05g0541750 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036192 | 4:28,942,952-28,946,761 | - | C1H4g10806 | C2H4g04887 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| CX4g033838 | 4:28,947,874-28,950,687 | - | C1H4g14313 | C2H4g04584 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| CX4g035336 | 4:28,959,392-28,960,183 | - | - | - | - | - | - | Detail |
| CX4g035777 | 4:28,961,145-28,964,840 | + | C1H4g07874 | C2H4g27064 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| CX4g036481 | 4:28,965,850-28,969,457 | - | C1H4g27386 | C2H4g24328 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| CX4g034160 | 4:28,974,902-28,977,052 | + | C1H4g18216 | C2H4g12106 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| CX4g035966 | 4:28,977,948-28,985,231 | + | C1H4g27663 | C2H4g12958 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| CX4g033578 | 4:28,989,086-28,989,441 | + | - | C2H4g09310 | LOC_Os04g56490 | Os04g0660000 | - | Detail |
| CX4g032744 | 4:28,996,198-28,996,806 | - | - | C2H4g03651 | LOC_Os04g56500 | Os04g0660100 | - | Detail |
| CX4g031374 | 4:29,002,555-29,002,704 | - | - | - | - | - | - | Detail |
| CX4g036525 | 4:29,010,906-29,016,014 | - | C1H4g08060 | C2H4g24952 | LOC_Os04g56510 | Os04g0660200 | - | Detail |
| CX4g036101 | 4:29,019,310-29,020,221 | + | C1H4g00868 | C2H4g30016 | LOC_Os04g56520 | Os04g0660400 | - | Detail |
| CX4g035137 | 4:29,021,004-29,031,957 | - | C1H4g10729 | C2H4g26135 | LOC_Os04g56530 | Os04g0660500 | OsMAPKKKε | Detail |
| CX4g034827 | 4:29,036,095-29,036,484 | - | - | - | - | - | - | Detail |
| CX4g033242 | 4:29,042,192-29,044,308 | + | C1H4g30756 | C2H4g17344 | LOC_Os04g56560 | Os04g0660900 | - | Detail |
| CX4g035810 | 4:29,045,518-29,046,291 | - | C1H4g23437 | C2H4g20585 | LOC_Os04g56570 | Os04g0661100 | - | Detail |
| CX4g035246 | 4:29,047,367-29,051,829 | - | C1H4g26877 | C2H4g04008 | LOC_Os04g56580 | Os04g0661200 | OsIPK1 | Detail |
| CX4g032179 | 4:29,052,861-29,059,004 | - | C1H4g26877 | C2H4g16922 | LOC_Os04g56590 | Os04g0661300 | - | Detail |
| CX4g035528 | 4:29,063,839-29,064,132 | + | C1H4g02251 | C2H4g07923 | LOC_Os04g56610 | - | - | Detail |
| CX4g032531 | 4:29,067,977-29,071,838 | + | C1H4g07215 | C2H4g09519 | LOC_Os04g56620 | Os04g0661600 | OsCNX1 | Detail |