| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g06298 | 11:5,748,326-5,752,225 | + | C2H11g00157 | CX11g013950 | LOC_Os11g11890 | Os11g0226201 | - | Detail |
| C1H11g26018 | 11:5,754,521-5,769,413 | - | C2H11g10142 | CX11g011196 | LOC_Os11g11990 | Os11g0227100 | - | Detail |
| C1H11g24668 | 11:5,847,852-5,850,575 | - | C2H11g10675 | CX11g013827 | LOC_Os11g11950 | Os11g0226800 | - | Detail |
| C1H11g10263 | 11:5,865,195-5,870,539 | - | C2H11g11689 | CX11g011196 | LOC_Os11g11960 | Os11g0226933 | - | Detail |
| C1H11g10072 | 11:5,873,006-5,873,576 | - | C2H11g11957 | CX11g010867 | LOC_Os11g11980 | Os11g0227000 | - | Detail |
| C1H11g01549 | 11:5,875,866-5,876,563 | - | C2H11g14188 | - | LOC_Os11g11970 | Os11g0226966 | - | Detail |
| C1H11g25169 | 11:5,896,490-5,897,050 | + | C2H11g23911 | CX11g013827 | LOC_Os11g12000 | Os11g0227200 | - | Detail |
| C1H11g09922 | 11:5,901,002-5,905,816 | - | C2H11g29976 | - | - | Os11g0227600 | - | Detail |
| C1H11g17829 | 11:5,905,365-5,907,935 | + | C2H11g08872 | CX11g011196 | LOC_Os11g12320 | Os11g0227700 | - | Detail |
| C1H11g07566 | 11:5,912,264-5,914,966 | + | C2H11g01121 | CX11g011196 | LOC_Os11g12330 | Os11g0229400 | - | Detail |
| C1H11g02786 | 11:5,922,707-5,929,081 | + | C2H11g01121 | CX11g011196 | LOC_Os11g12350 | Os11g0229500 | RPR1, OsRSR1 | Detail |
| C1H11g28059 | 11:5,970,472-5,972,478 | + | C2H11g11028 | CX11g014044 | LOC_Os11g12410 | Os11g0230400 | - | Detail |
| C1H11g28297 | 11:5,980,423-5,981,717 | + | C2H11g07743 | CX11g012409 | LOC_Os11g12420 | Os11g0230700 | - | Detail |
| C1H11g28440 | 11:5,989,706-5,991,032 | + | C2H11g13470 | CX11g014044 | LOC_Os11g12460 | Os11g0231200 | - | Detail |
| C1H11g12986 | 11:5,995,153-5,996,451 | - | C2H11g15389 | CX11g011240 | LOC_Os11g12470 | Os11g0231400 | - | Detail |
| C1H11g18273 | 11:6,000,042-6,000,491 | + | C2H11g27293 | - | - | - | - | Detail |
| C1H11g13870 | 11:6,002,237-6,004,051 | + | C2H11g29294 | CX11g012962 | LOC_Os11g12480 | Os11g0231600 | - | Detail |
| C1H11g26307 | 11:6,009,260-6,010,717 | + | C2H11g11520 | CX11g014044 | LOC_Os11g12490 | Os11g0231800 | - | Detail |
| C1H11g21887 | 11:6,027,991-6,029,144 | + | C2H11g11520 | CX11g012409 | LOC_Os11g12520 | Os11g0232000 | - | Detail |
| C1H11g15217 | 11:6,037,406-6,038,014 | + | C2H11g30123 | CX11g014044 | LOC_Os11g12520 | Os11g0232000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g036192 | 4:28,942,952-28,946,761 | - | C1H4g10806 | C2H4g04887 | LOC_Os04g56400 | Os04g0659100 | - | Detail |
| CX4g033838 | 4:28,947,874-28,950,687 | - | C1H4g14313 | C2H4g04584 | LOC_Os04g56405 | Os04g0659150 | - | Detail |
| CX4g035336 | 4:28,959,392-28,960,183 | - | - | - | - | - | - | Detail |
| CX4g035777 | 4:28,961,145-28,964,840 | + | C1H4g07874 | C2H4g27064 | LOC_Os04g56440 | Os04g0659400 | - | Detail |
| CX4g036481 | 4:28,965,850-28,969,457 | - | C1H4g27386 | C2H4g24328 | LOC_Os04g56450 | Os04g0659500 | - | Detail |
| CX4g034160 | 4:28,974,902-28,977,052 | + | C1H4g18216 | C2H4g12106 | LOC_Os04g56470 | Os04g0659800 | OsAAP14 | Detail |
| CX4g035966 | 4:28,977,948-28,985,231 | + | C1H4g27663 | C2H4g12958 | LOC_Os04g56480 | Os04g0659900 | LML1, OsPELOTA, splHM47, spl<sup>HM47</sup> | Detail |
| CX4g033578 | 4:28,989,086-28,989,441 | + | - | C2H4g09310 | LOC_Os04g56490 | Os04g0660000 | - | Detail |
| CX4g032744 | 4:28,996,198-28,996,806 | - | - | C2H4g03651 | LOC_Os04g56500 | Os04g0660100 | - | Detail |
| CX4g031374 | 4:29,002,555-29,002,704 | - | - | - | - | - | - | Detail |
| CX4g036525 | 4:29,010,906-29,016,014 | - | C1H4g08060 | C2H4g24952 | LOC_Os04g56510 | Os04g0660200 | - | Detail |
| CX4g036101 | 4:29,019,310-29,020,221 | + | C1H4g00868 | C2H4g30016 | LOC_Os04g56520 | Os04g0660400 | - | Detail |
| CX4g035137 | 4:29,021,004-29,031,957 | - | C1H4g10729 | C2H4g26135 | LOC_Os04g56530 | Os04g0660500 | OsMAPKKKε | Detail |
| CX4g034827 | 4:29,036,095-29,036,484 | - | - | - | - | - | - | Detail |
| CX4g033242 | 4:29,042,192-29,044,308 | + | C1H4g30756 | C2H4g17344 | LOC_Os04g56560 | Os04g0660900 | - | Detail |
| CX4g035810 | 4:29,045,518-29,046,291 | - | C1H4g23437 | C2H4g20585 | LOC_Os04g56570 | Os04g0661100 | - | Detail |
| CX4g035246 | 4:29,047,367-29,051,829 | - | C1H4g26877 | C2H4g04008 | LOC_Os04g56580 | Os04g0661200 | OsIPK1 | Detail |
| CX4g032179 | 4:29,052,861-29,059,004 | - | C1H4g26877 | C2H4g16922 | LOC_Os04g56590 | Os04g0661300 | - | Detail |
| CX4g035528 | 4:29,063,839-29,064,132 | + | C1H4g02251 | C2H4g07923 | LOC_Os04g56610 | - | - | Detail |
| CX4g032531 | 4:29,067,977-29,071,838 | + | C1H4g07215 | C2H4g09519 | LOC_Os04g56620 | Os04g0661600 | OsCNX1 | Detail |