| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g14461 | 2:27,983,381-27,985,425 | - | C1H2g00972 | CX2g020051 | LOC_Os02g49880 | Os02g0731700 | OsK, Ghd2 | Detail |
| C2H2g05011 | 2:28,001,819-28,003,276 | + | C1H2g08007 | CX2g023216 | LOC_Os02g49920 | Os02g0731900 | OsCUT2 | Detail |
| C2H2g12585 | 2:28,009,364-28,013,958 | + | C1H2g22578 | CX2g022879 | LOC_Os02g49950 | Os02g0732200 | - | Detail |
| C2H2g26422 | 2:28,016,168-28,017,969 | + | C1H2g08019 | - | LOC_Os02g49960 | Os02g0732300 | - | Detail |
| C2H2g20922 | 2:28,025,782-28,026,672 | + | C1H2g28110 | CX2g019464 | LOC_Os02g49970 | Os02g0732400 | - | Detail |
| C2H2g17194 | 2:28,029,944-28,033,017 | - | C1H2g10850 | CX2g023132 | LOC_Os02g49980 | Os02g0732500 | - | Detail |
| C2H2g26612 | 2:28,036,294-28,037,331 | - | C1H2g05502 | CX2g021353 | LOC_Os02g49986 | Os02g0732600 | Os2R_MYB30 | Detail |
| C2H2g25135 | 2:28,038,484-28,050,004 | - | C1H2g24742 | CX2g020946 | LOC_Os02g49992 | Os02g0732700 | - | Detail |
| C2H2g26888 | 2:28,050,947-28,052,542 | - | C1H2g27424 | CX2g023389 | LOC_Os02g50000 | Os02g0732800 | - | Detail |
| C2H2g07391 | 2:28,053,843-28,057,196 | + | C1H2g26386 | CX2g020808 | LOC_Os02g50010 | Os02g0732900 | - | Detail |
| C2H2g23355 | 2:28,057,447-28,059,601 | - | C1H2g27002 | CX2g019891 | LOC_Os02g50020 | Os02g0733001 | - | Detail |
| C2H2g17859 | 2:28,065,683-28,068,761 | + | C1H2g31248 | CX2g019255 | LOC_Os02g50040 | Os02g0733300 | OsGH9B1 | Detail |
| C2H2g23239 | 2:28,069,133-28,069,789 | - | C1H2g05277 | CX2g024096 | LOC_Os02g50050 | Os02g0733400 | - | Detail |
| C2H2g09796 | 2:28,071,260-28,071,796 | - | C1H2g28250 | CX2g023041 | LOC_Os02g50060 | Os02g0733500 | - | Detail |
| C2H2g06681 | 2:28,073,838-28,074,380 | - | - | - | - | - | - | Detail |
| C2H2g29637 | 2:28,078,545-28,081,151 | + | C1H2g25545 | CX2g024530 | LOC_Os02g50100 | Os02g0733800 | - | Detail |
| C2H2g26091 | 2:28,081,751-28,081,993 | - | - | CX2g020845 | LOC_Os02g50110 | Os02g0733900 | OsSYL2 | Detail |
| C2H2g14181 | 2:28,100,291-28,100,920 | + | C1H2g09486 | CX2g019678 | LOC_Os02g50130 | Os02g0734300 | - | Detail |
| C2H2g24179 | 2:28,113,048-28,114,363 | + | C1H2g30933 | - | LOC_Os02g50140 | Os02g0734400 | - | Detail |
| C2H2g04511 | 2:28,118,219-28,120,246 | + | C1H2g30933 | - | LOC_Os02g50174 | Os02g0734500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034733 | 4:28,609,994-28,615,991 | + | C1H4g21279 | C2H4g13053 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| CX4g032019 | 4:28,617,897-28,618,299 | + | C1H4g27223 | C2H4g17182 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g034882 | 4:28,619,289-28,620,161 | + | C1H4g01148 | C2H4g24107 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g035227 | 4:28,621,814-28,623,947 | - | C1H4g09382 | C2H4g15013 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| CX4g035735 | 4:28,639,876-28,640,041 | - | - | - | - | - | - | Detail |
| CX4g034020 | 4:28,641,646-28,644,969 | + | C1H4g27108 | C2H4g11780 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| CX4g036062 | 4:28,646,133-28,647,896 | - | C1H4g20973 | C2H4g28993 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| CX4g034519 | 4:28,650,185-28,653,556 | + | C1H4g27383 | C2H4g12547 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| CX4g033116 | 4:28,664,866-28,670,411 | + | C1H4g13362 | C2H4g18627 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| CX4g034984 | 4:28,676,197-28,676,892 | - | - | - | - | - | - | Detail |
| CX4g031647 | 4:28,679,738-28,683,633 | + | C1H4g12359 | C2H4g04898 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| CX4g034121 | 4:28,687,656-28,687,979 | - | - | C2H4g03477 | LOC_Os04g56010 | - | - | Detail |
| CX4g035335 | 4:28,690,455-28,691,116 | - | C1H4g06436 | C2H4g01694 | - | - | - | Detail |
| CX4g032215 | 4:28,693,797-28,694,201 | - | C1H4g26365 | C2H4g13579 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| CX4g031454 | 4:28,702,744-28,707,429 | + | C1H4g14701 | C2H4g22020 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| CX4g034657 | 4:28,717,494-28,719,929 | - | C1H4g04876 | C2H4g17724 | LOC_Os04g56080 | Os04g0654800 | SDRLK-55 | Detail |
| CX4g035423 | 4:28,725,123-28,727,573 | + | C1H4g04876 | C2H4g14024 | LOC_Os04g56090 | Os04g0655000 | SDRLK-33 | Detail |
| CX4g032288 | 4:28,751,408-28,752,600 | + | C1H4g04876 | C2H4g14879 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| CX4g033115 | 4:28,757,576-28,758,715 | - | C1H4g27782 | C2H4g02357 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| CX4g033679 | 4:28,775,592-28,776,950 | - | C1H4g27782 | C2H4g10579 | LOC_Os04g56120 | Os04g0655400 | - | Detail |