| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g09582 | 2:6,591,411-6,593,681 | - | C1H2g27279 | CX2g023589 | LOC_Os02g13380 | Os02g0227200 | - | Detail |
| C2H2g07399 | 2:6,596,978-6,602,883 | + | C1H2g17086 | CX2g023337 | LOC_Os02g13400 | Os02g0227400 | - | Detail |
| C2H2g19169 | 2:6,605,422-6,606,121 | - | C1H2g08528 | - | LOC_Os02g13450 | - | - | Detail |
| C2H2g27180 | 2:6,613,114-6,616,451 | - | C1H2g27344 | CX2g024122 | LOC_Os02g13430 | Os02g0227700 | - | Detail |
| C2H2g25704 | 2:6,617,568-6,619,214 | - | C1H2g21596 | - | LOC_Os02g13450 | - | - | Detail |
| C2H2g03228 | 2:6,628,597-6,630,566 | - | C1H2g25417 | CX2g024892 | LOC_Os02g13430 | Os02g0227900 | - | Detail |
| C2H2g18799 | 2:6,636,717-6,638,204 | - | C1H2g24817 | CX2g023289 | LOC_Os02g13460 | Os02g0228000 | - | Detail |
| C2H2g13441 | 2:6,649,532-6,652,835 | - | C1H2g25235 | CX2g023289 | LOC_Os02g13510 | Os02g0228300 | - | Detail |
| C2H2g22462 | 2:6,666,429-6,666,785 | - | C1H2g23289 | CX2g023224 | - | Os02g0228600 | - | Detail |
| C2H2g05217 | 2:6,669,975-6,673,664 | - | C1H2g16622 | CX2g021147 | LOC_Os02g13520 | Os02g0228900 | - | Detail |
| C2H2g15583 | 2:6,681,735-6,683,762 | - | C1H2g12806 | CX6g045470 | LOC_Os02g13530 | Os02g0229000 | - | Detail |
| C2H2g07545 | 2:6,699,800-6,705,137 | + | C1H2g14306 | CX2g018941 | LOC_Os02g13560 | Os02g0229400 | - | Detail |
| C2H2g14867 | 2:6,706,228-6,712,609 | - | C1H2g11910 | CX2g021414 | LOC_Os02g13570 | Os02g0229600 | - | Detail |
| C2H2g23679 | 2:6,734,095-6,734,446 | - | C1H2g23729 | - | LOC_Os02g13630 | Os02g0230000 | - | Detail |
| C2H2g16687 | 2:6,736,233-6,739,220 | + | C1H2g06642 | CX2g019397 | LOC_Os02g13640 | Os02g0230100 | - | Detail |
| C2H2g04097 | 2:6,744,448-6,745,482 | - | C1H2g30749 | CX2g023129 | LOC_Os02g13660 | Os02g0230300 | RA68 | Detail |
| C2H2g00325 | 2:6,755,668-6,756,611 | - | C1H2g30268 | CX2g024196 | LOC_Os02g13670 | - | - | Detail |
| C2H2g10682 | 2:6,782,984-6,783,773 | - | C1H2g26929 | - | - | Os02g0230875 | - | Detail |
| C2H2g21959 | 2:6,835,612-6,836,240 | - | C1H2g22450 | CX2g019086 | LOC_Os02g13760 | Os02g0725500 | - | Detail |
| C2H2g01859 | 2:6,837,859-6,839,119 | + | C1H2g27239 | CX2g021884 | LOC_Os02g13770 | Os02g0231600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034733 | 4:28,609,994-28,615,991 | + | C1H4g21279 | C2H4g13053 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| CX4g032019 | 4:28,617,897-28,618,299 | + | C1H4g27223 | C2H4g17182 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g034882 | 4:28,619,289-28,620,161 | + | C1H4g01148 | C2H4g24107 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g035227 | 4:28,621,814-28,623,947 | - | C1H4g09382 | C2H4g15013 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| CX4g035735 | 4:28,639,876-28,640,041 | - | - | - | - | - | - | Detail |
| CX4g034020 | 4:28,641,646-28,644,969 | + | C1H4g27108 | C2H4g11780 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| CX4g036062 | 4:28,646,133-28,647,896 | - | C1H4g20973 | C2H4g28993 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| CX4g034519 | 4:28,650,185-28,653,556 | + | C1H4g27383 | C2H4g12547 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| CX4g033116 | 4:28,664,866-28,670,411 | + | C1H4g13362 | C2H4g18627 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| CX4g034984 | 4:28,676,197-28,676,892 | - | - | - | - | - | - | Detail |
| CX4g031647 | 4:28,679,738-28,683,633 | + | C1H4g12359 | C2H4g04898 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| CX4g034121 | 4:28,687,656-28,687,979 | - | - | C2H4g03477 | LOC_Os04g56010 | - | - | Detail |
| CX4g035335 | 4:28,690,455-28,691,116 | - | C1H4g06436 | C2H4g01694 | - | - | - | Detail |
| CX4g032215 | 4:28,693,797-28,694,201 | - | C1H4g26365 | C2H4g13579 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| CX4g031454 | 4:28,702,744-28,707,429 | + | C1H4g14701 | C2H4g22020 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| CX4g034657 | 4:28,717,494-28,719,929 | - | C1H4g04876 | C2H4g17724 | LOC_Os04g56080 | Os04g0654800 | SDRLK-55 | Detail |
| CX4g035423 | 4:28,725,123-28,727,573 | + | C1H4g04876 | C2H4g14024 | LOC_Os04g56090 | Os04g0655000 | SDRLK-33 | Detail |
| CX4g032288 | 4:28,751,408-28,752,600 | + | C1H4g04876 | C2H4g14879 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| CX4g033115 | 4:28,757,576-28,758,715 | - | C1H4g27782 | C2H4g02357 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| CX4g033679 | 4:28,775,592-28,776,950 | - | C1H4g27782 | C2H4g10579 | LOC_Os04g56120 | Os04g0655400 | - | Detail |