| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16166 | 6:5,860,139-5,862,274 | - | C1H6g21159 | CX6g043741 | - | - | - | Detail |
| C2H6g09603 | 6:5,869,781-5,870,419 | + | C1H6g24258 | CX6g045111 | LOC_Os06g12660 | Os06g0233000 | - | Detail |
| C2H6g04087 | 6:5,876,090-5,877,403 | - | C1H6g09350 | CX6g044964 | LOC_Os06g12680 | Os06g0233200 | - | Detail |
| C2H6g09674 | 6:5,882,335-5,886,243 | - | C1H6g18748 | CX6g044350 | LOC_Os06g12690 | Os06g0233400 | - | Detail |
| C2H6g20779 | 6:5,890,890-5,891,605 | + | C1H6g17516 | - | - | - | - | Detail |
| C2H6g07960 | 6:5,897,543-5,899,950 | - | C1H6g05704 | CX6g041294 | LOC_Os06g12740 | Os06g0233800 | - | Detail |
| C2H6g03992 | 6:5,920,516-5,926,707 | + | C1H6g05207 | CX6g043717 | LOC_Os06g12780 | Os06g0234100 | - | Detail |
| C2H6g26334 | 6:5,932,045-5,935,368 | + | C1H6g29533 | CX6g044187 | LOC_Os06g12790 | Os06g0234200 | - | Detail |
| C2H6g20783 | 6:5,936,198-5,937,562 | - | C1H6g00666 | CX6g041716 | LOC_Os06g12800 | Os06g0234300 | - | Detail |
| C2H6g16386 | 6:5,938,407-5,940,459 | - | C1H6g11034 | CX6g041297 | LOC_Os06g12810 | Os06g0234400 | - | Detail |
| C2H6g22253 | 6:5,941,821-5,943,958 | - | C1H6g11034 | - | LOC_Os06g12810 | - | - | Detail |
| C2H6g03112 | 6:5,946,623-5,949,456 | - | C1H6g30871 | CX6g042169 | LOC_Os06g12820 | Os06g0234600 | - | Detail |
| C2H6g09989 | 6:5,957,623-5,957,841 | + | C1H6g02126 | - | - | Os06g0234633 | - | Detail |
| C2H6g14293 | 6:5,959,127-5,960,822 | - | C1H6g02409 | CX6g042169 | LOC_Os06g12830 | Os06g0234800 | - | Detail |
| C2H6g22948 | 6:5,964,644-5,966,040 | - | C1H6g04373 | CX6g042169 | LOC_Os06g12840 | Os06g0234900 | - | Detail |
| C2H6g18498 | 6:5,969,497-5,970,885 | - | C1H6g11313 | CX6g042169 | LOC_Os06g12850 | Os06g0235000 | - | Detail |
| C2H6g07516 | 6:5,975,172-5,975,570 | + | - | CX6g044010 | LOC_Os12g28520 | Os12g0470000 | - | Detail |
| C2H6g08058 | 6:5,976,799-5,978,148 | - | C1H6g25131 | CX6g042169 | LOC_Os06g12860 | Os06g0235100 | - | Detail |
| C2H6g05944 | 6:5,982,229-5,985,568 | - | C1H6g01489 | CX6g042169 | LOC_Os06g12870 | Os06g0235200 | - | Detail |
| C2H6g08153 | 6:5,985,685-5,994,184 | + | C1H6g27476 | CX6g045628 | LOC_Os06g12882 | Os06g0235400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034733 | 4:28,609,994-28,615,991 | + | C1H4g21279 | C2H4g13053 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| CX4g032019 | 4:28,617,897-28,618,299 | + | C1H4g27223 | C2H4g17182 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g034882 | 4:28,619,289-28,620,161 | + | C1H4g01148 | C2H4g24107 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g035227 | 4:28,621,814-28,623,947 | - | C1H4g09382 | C2H4g15013 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| CX4g035735 | 4:28,639,876-28,640,041 | - | - | - | - | - | - | Detail |
| CX4g034020 | 4:28,641,646-28,644,969 | + | C1H4g27108 | C2H4g11780 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| CX4g036062 | 4:28,646,133-28,647,896 | - | C1H4g20973 | C2H4g28993 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| CX4g034519 | 4:28,650,185-28,653,556 | + | C1H4g27383 | C2H4g12547 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| CX4g033116 | 4:28,664,866-28,670,411 | + | C1H4g13362 | C2H4g18627 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| CX4g034984 | 4:28,676,197-28,676,892 | - | - | - | - | - | - | Detail |
| CX4g031647 | 4:28,679,738-28,683,633 | + | C1H4g12359 | C2H4g04898 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| CX4g034121 | 4:28,687,656-28,687,979 | - | - | C2H4g03477 | LOC_Os04g56010 | - | - | Detail |
| CX4g035335 | 4:28,690,455-28,691,116 | - | C1H4g06436 | C2H4g01694 | - | - | - | Detail |
| CX4g032215 | 4:28,693,797-28,694,201 | - | C1H4g26365 | C2H4g13579 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| CX4g031454 | 4:28,702,744-28,707,429 | + | C1H4g14701 | C2H4g22020 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| CX4g034657 | 4:28,717,494-28,719,929 | - | C1H4g04876 | C2H4g17724 | LOC_Os04g56080 | Os04g0654800 | SDRLK-55 | Detail |
| CX4g035423 | 4:28,725,123-28,727,573 | + | C1H4g04876 | C2H4g14024 | LOC_Os04g56090 | Os04g0655000 | SDRLK-33 | Detail |
| CX4g032288 | 4:28,751,408-28,752,600 | + | C1H4g04876 | C2H4g14879 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| CX4g033115 | 4:28,757,576-28,758,715 | - | C1H4g27782 | C2H4g02357 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| CX4g033679 | 4:28,775,592-28,776,950 | - | C1H4g27782 | C2H4g10579 | LOC_Os04g56120 | Os04g0655400 | - | Detail |