| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g26850 | 5:12,479,801-12,484,786 | - | C2H5g12100 | CX5g040823 | LOC_Os05g26890 | Os05g0333200 | D1, RGA1 | Detail |
| C1H5g09873 | 5:12,505,097-12,509,299 | - | C2H5g13294 | CX5g039023 | LOC_Os05g26926 | Os05g0334400 | OsDjA8, OsDjA7/8 | Detail |
| C1H5g26652 | 5:12,517,998-12,519,299 | - | C2H5g05539 | CX5g039430 | LOC_Os05g26940 | Os05g0334750 | - | Detail |
| C1H5g14628 | 5:12,524,654-12,531,633 | - | C2H5g00998 | CX5g039567 | LOC_Os05g26954 | Os05g0335100 | - | Detail |
| C1H5g28741 | 5:12,543,862-12,544,554 | + | C2H5g01656 | CX5g039300 | LOC_Os05g27000 | Os05g0335500 | - | Detail |
| C1H5g13136 | 5:12,551,896-12,560,777 | - | C2H5g11593 | CX5g039294 | LOC_Os05g27010 | Os05g0335800 | - | Detail |
| C1H5g08274 | 5:12,571,128-12,572,595 | - | C2H5g29679 | CX5g040542 | LOC_Os05g27090 | Os05g0337200 | - | Detail |
| C1H5g13307 | 5:12,587,298-12,590,018 | - | C2H5g27066 | CX5g038207 | LOC_Os05g27100 | Os05g0337400 | - | Detail |
| C1H5g16890 | 5:12,643,183-12,652,710 | + | C2H5g06947 | CX5g040973 | LOC_Os05g27304 | Os05g0338900 | - | Detail |
| C1H5g20164 | 5:12,653,188-12,659,388 | - | C2H5g16002 | CX5g040584 | LOC_Os05g27320 | Os05g0339000 | - | Detail |
| C1H5g07750 | 5:12,673,437-12,674,871 | + | C2H5g15328 | CX5g039225 | LOC_Os05g27340 | Os05g0339200 | - | Detail |
| C1H5g13370 | 5:12,686,781-12,687,551 | - | C2H1g23312 | CX12g016277 | - | - | - | Detail |
| C1H5g30721 | 5:12,714,916-12,716,721 | - | - | CX5g037597 | LOC_Os06g40420 | Os01g0150950 | - | Detail |
| C1H5g05577 | 5:12,719,799-12,722,730 | + | C2H5g14220 | CX5g036883 | LOC_Os05g27500 | Os05g0341100 | - | Detail |
| C1H5g03022 | 5:12,737,464-12,742,375 | - | C2H5g02870 | CX5g040935 | LOC_Os05g26890 | Os05g0333200 | D1, RGA1 | Detail |
| C1H5g06416 | 5:12,744,527-12,747,850 | - | C2H5g23486 | CX5g038002 | LOC_Os05g27530 | Os05g0341600 | - | Detail |
| C1H5g16606 | 5:12,766,052-12,768,659 | - | C2H5g01175 | CX5g037918 | LOC_Os05g27580 | Os05g0342000 | - | Detail |
| C1H5g03243 | 5:12,769,223-12,771,791 | - | C2H5g01175 | CX5g037918 | LOC_Os05g27580 | - | - | Detail |
| C1H5g21954 | 5:12,779,704-12,780,246 | - | C2H5g01175 | CX5g036953 | LOC_Os05g27590 | Os05g0342100 | - | Detail |
| C1H5g14668 | 5:12,797,273-12,800,923 | + | C2H5g27836 | CX5g037297 | LOC_Os05g27660 | Os05g0342900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034733 | 4:28,609,994-28,615,991 | + | C1H4g21279 | C2H4g13053 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| CX4g032019 | 4:28,617,897-28,618,299 | + | C1H4g27223 | C2H4g17182 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g034882 | 4:28,619,289-28,620,161 | + | C1H4g01148 | C2H4g24107 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g035227 | 4:28,621,814-28,623,947 | - | C1H4g09382 | C2H4g15013 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| CX4g035735 | 4:28,639,876-28,640,041 | - | - | - | - | - | - | Detail |
| CX4g034020 | 4:28,641,646-28,644,969 | + | C1H4g27108 | C2H4g11780 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| CX4g036062 | 4:28,646,133-28,647,896 | - | C1H4g20973 | C2H4g28993 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| CX4g034519 | 4:28,650,185-28,653,556 | + | C1H4g27383 | C2H4g12547 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| CX4g033116 | 4:28,664,866-28,670,411 | + | C1H4g13362 | C2H4g18627 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| CX4g034984 | 4:28,676,197-28,676,892 | - | - | - | - | - | - | Detail |
| CX4g031647 | 4:28,679,738-28,683,633 | + | C1H4g12359 | C2H4g04898 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| CX4g034121 | 4:28,687,656-28,687,979 | - | - | C2H4g03477 | LOC_Os04g56010 | - | - | Detail |
| CX4g035335 | 4:28,690,455-28,691,116 | - | C1H4g06436 | C2H4g01694 | - | - | - | Detail |
| CX4g032215 | 4:28,693,797-28,694,201 | - | C1H4g26365 | C2H4g13579 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| CX4g031454 | 4:28,702,744-28,707,429 | + | C1H4g14701 | C2H4g22020 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| CX4g034657 | 4:28,717,494-28,719,929 | - | C1H4g04876 | C2H4g17724 | LOC_Os04g56080 | Os04g0654800 | SDRLK-55 | Detail |
| CX4g035423 | 4:28,725,123-28,727,573 | + | C1H4g04876 | C2H4g14024 | LOC_Os04g56090 | Os04g0655000 | SDRLK-33 | Detail |
| CX4g032288 | 4:28,751,408-28,752,600 | + | C1H4g04876 | C2H4g14879 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| CX4g033115 | 4:28,757,576-28,758,715 | - | C1H4g27782 | C2H4g02357 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| CX4g033679 | 4:28,775,592-28,776,950 | - | C1H4g27782 | C2H4g10579 | LOC_Os04g56120 | Os04g0655400 | - | Detail |