| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H11g12913 | 11:13,132,191-13,135,065 | - | C2H11g16214 | CX11g012957 | LOC_Os11g25700 | Os11g0443700 | - | Detail |
| C1H11g04749 | 11:13,167,508-13,168,530 | + | C2H11g07005 | CX11g011904 | LOC_Os11g25780 | Os11g0444700 | - | Detail |
| C1H11g19485 | 11:13,187,596-13,188,369 | + | C2H11g06487 | CX11g013403 | LOC_Os11g25780 | Os11g0444700 | - | Detail |
| C1H11g28391 | 11:13,196,228-13,199,091 | - | C2H11g02987 | - | - | - | - | Detail |
| C1H11g31601 | 11:13,207,168-13,207,573 | + | C2H11g27394 | - | - | - | - | Detail |
| C1H11g10558 | 11:13,244,867-13,248,930 | + | C2H11g29847 | CX11g011625 | LOC_Os11g25920 | Os11g0446000 | RSS3 | Detail |
| C1H11g07790 | 11:13,268,689-13,288,589 | + | C2H11g23151 | CX11g013991 | LOC_Os11g25980 | Os11g0446500 | - | Detail |
| C1H11g09251 | 11:13,342,013-13,346,021 | - | C2H11g07636 | CX11g013291 | - | - | - | Detail |
| C1H11g30298 | 11:13,347,066-13,347,524 | + | C2H11g29907 | - | - | - | - | Detail |
| C1H11g14144 | 11:13,352,186-13,359,233 | + | C2H11g20908 | CX11g012501 | LOC_Os11g26030 | Os11g0447300 | - | Detail |
| C1H11g04234 | 11:13,390,910-13,398,562 | + | C2H11g17659 | CX11g012981 | LOC_Os11g26130 | Os11g0448000 | OsWSS1 | Detail |
| C1H11g13717 | 11:13,401,164-13,403,931 | + | C2H11g03937 | CX11g012888 | LOC_Os11g26140 | Os11g0448200 | ARK1 | Detail |
| C1H11g04240 | 11:13,404,898-13,409,728 | + | C2H11g29204 | CX11g013778 | LOC_Os11g26160 | Os11g0448400 | - | Detail |
| C1H11g26780 | 11:13,504,421-13,505,054 | - | C2H11g08345 | CX11g014676 | LOC_Os11g26390 | Os11g0450400 | - | Detail |
| C1H11g29112 | 11:13,512,137-13,513,124 | + | C2H11g06228 | CX11g013361 | - | - | - | Detail |
| C1H11g11929 | 11:13,586,862-13,587,945 | - | C2H11g13143 | CX11g011978 | LOC_Os11g26570 | Os11g0451700 | - | Detail |
| C1H11g00705 | 11:13,602,761-13,604,055 | - | C2H11g19619 | - | - | - | - | Detail |
| C1H11g18633 | 11:13,605,477-13,605,977 | - | C2H11g06074 | - | - | - | - | Detail |
| C1H11g03837 | 11:13,632,711-13,633,102 | - | C2H11g04557 | - | LOC_Os11g26710 | Os11g0453550 | - | Detail |
| C1H11g13755 | 11:13,656,258-13,658,923 | - | C2H11g11432 | - | LOC_Os11g26730 | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034733 | 4:28,609,994-28,615,991 | + | C1H4g21279 | C2H4g13053 | LOC_Os04g55840 | Os04g0652600 | - | Detail |
| CX4g032019 | 4:28,617,897-28,618,299 | + | C1H4g27223 | C2H4g17182 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g034882 | 4:28,619,289-28,620,161 | + | C1H4g01148 | C2H4g24107 | LOC_Os04g55850 | Os04g0652700 | - | Detail |
| CX4g035227 | 4:28,621,814-28,623,947 | - | C1H4g09382 | C2H4g15013 | LOC_Os04g55860 | Os04g0652900 | - | Detail |
| CX4g035735 | 4:28,639,876-28,640,041 | - | - | - | - | - | - | Detail |
| CX4g034020 | 4:28,641,646-28,644,969 | + | C1H4g27108 | C2H4g11780 | LOC_Os04g55920 | Os04g0653000 | EG2, OsTIFY3, OsJAZ10, OsJAZ 1, OsJAZ1, EG2/OsJAZ1, JAZ1/EG2 | Detail |
| CX4g036062 | 4:28,646,133-28,647,896 | - | C1H4g20973 | C2H4g28993 | LOC_Os04g55930 | Os04g0653100 | - | Detail |
| CX4g034519 | 4:28,650,185-28,653,556 | + | C1H4g27383 | C2H4g12547 | LOC_Os04g55940 | Os04g0653200 | OsCAX3 | Detail |
| CX4g033116 | 4:28,664,866-28,670,411 | + | C1H4g13362 | C2H4g18627 | LOC_Os04g55960 | Os04g0653400 | - | Detail |
| CX4g034984 | 4:28,676,197-28,676,892 | - | - | - | - | - | - | Detail |
| CX4g031647 | 4:28,679,738-28,683,633 | + | C1H4g12359 | C2H4g04898 | LOC_Os04g55970 | Os04g0653600 | - | Detail |
| CX4g034121 | 4:28,687,656-28,687,979 | - | - | C2H4g03477 | LOC_Os04g56010 | - | - | Detail |
| CX4g035335 | 4:28,690,455-28,691,116 | - | C1H4g06436 | C2H4g01694 | - | - | - | Detail |
| CX4g032215 | 4:28,693,797-28,694,201 | - | C1H4g26365 | C2H4g13579 | LOC_Os04g56040 | Os04g0654400 | - | Detail |
| CX4g031454 | 4:28,702,744-28,707,429 | + | C1H4g14701 | C2H4g22020 | LOC_Os04g56060 | Os04g0654600 | - | Detail |
| CX4g034657 | 4:28,717,494-28,719,929 | - | C1H4g04876 | C2H4g17724 | LOC_Os04g56080 | Os04g0654800 | SDRLK-55 | Detail |
| CX4g035423 | 4:28,725,123-28,727,573 | + | C1H4g04876 | C2H4g14024 | LOC_Os04g56090 | Os04g0655000 | SDRLK-33 | Detail |
| CX4g032288 | 4:28,751,408-28,752,600 | + | C1H4g04876 | C2H4g14879 | LOC_Os04g56110 | Os04g0655300 | OsRLCK168 | Detail |
| CX4g033115 | 4:28,757,576-28,758,715 | - | C1H4g27782 | C2H4g02357 | LOC_Os04g56120 | Os04g0655400 | - | Detail |
| CX4g033679 | 4:28,775,592-28,776,950 | - | C1H4g27782 | C2H4g10579 | LOC_Os04g56120 | Os04g0655400 | - | Detail |