| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g21066 | 8:20,294,440-20,298,567 | + | C1H8g07271 | CX8g054252 | LOC_Os08g37820 | Os08g0484800 | - | Detail |
| C2H8g02429 | 8:20,305,319-20,306,308 | - | - | - | LOC_Os08g37840 | Os08g0485000 | - | Detail |
| C2H8g11309 | 8:20,316,438-20,323,570 | + | C1H8g08354 | CX8g054237 | LOC_Os08g37874 | Os08g0485400 | - | Detail |
| C2H8g09800 | 8:20,327,851-20,328,311 | + | C1H8g24443 | CX8g050461 | LOC_Os08g37890 | Os08g0485500 | RAE2, OsEPFL1, EPFL1, GAD1 | Detail |
| C2H8g22834 | 8:20,331,886-20,337,354 | + | C1H8g08175 | CX8g054267 | LOC_Os08g37904 | Os08g0485600 | - | Detail |
| C2H8g11998 | 8:20,345,869-20,352,164 | + | C1H8g13898 | CX8g053049 | LOC_Os08g37920 | Os08g0485700 | - | Detail |
| C2H8g20917 | 8:20,353,093-20,355,855 | - | C1H8g11808 | CX8g053483 | LOC_Os08g37930 | Os08g0485800 | - | Detail |
| C2H8g01955 | 8:20,357,441-20,360,495 | - | C1H8g21083 | CX8g052013 | LOC_Os08g37940 | Os08g0485900 | - | Detail |
| C2H8g06885 | 8:20,362,408-20,370,645 | + | C1H8g12876 | CX8g054609 | LOC_Os08g37950 | Os08g0486100 | - | Detail |
| C2H8g17660 | 8:20,371,756-20,374,662 | - | C1H8g09919 | CX8g050748 | LOC_Os08g37960 | Os08g0486200 | - | Detail |
| C2H8g28570 | 8:20,383,371-20,384,904 | - | C1H8g05150 | CX8g052173 | LOC_Os08g37970 | Os08g0486300 | Os2R_MYB80 | Detail |
| C2H8g10262 | 8:20,400,922-20,401,419 | + | C1H9g18707 | CX8g052825 | LOC_Os08g37990 | Os08g0486700 | - | Detail |
| C2H8g22845 | 8:20,405,636-20,408,083 | + | C1H8g06962 | CX8g052559 | LOC_Os08g38010 | Os08g0487000 | - | Detail |
| C2H8g02123 | 8:20,410,265-20,410,954 | - | C1H8g07010 | CX8g053523 | LOC_Os08g38020 | Os08g0487100 | - | Detail |
| C2H8g17510 | 8:20,427,743-20,430,762 | - | C1H8g09056 | CX8g053173 | LOC_Os08g38060 | Os08g0487500 | - | Detail |
| C2H8g21912 | 8:20,437,235-20,439,233 | + | C1H8g03415 | CX8g054700 | LOC_Os08g38080 | Os08g0487700 | - | Detail |
| C2H8g01365 | 8:20,440,173-20,444,679 | - | C1H8g23582 | CX8g051291 | LOC_Os08g38086 | Os08g0487800 | - | Detail |
| C2H8g04096 | 8:20,445,612-20,449,097 | - | C1H8g16452 | CX8g051898 | LOC_Os08g38092 | Os08g0487900 | - | Detail |
| C2H8g24896 | 8:20,456,733-20,458,202 | + | C1H8g23496 | CX8g051261 | LOC_Os08g38110 | Os08g0489100 | - | Detail |
| C2H8g03266 | 8:20,466,541-20,467,333 | - | - | CX8g053079 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005051 | 1:21,213,085-21,218,233 | - | C1H1g30244 | C2H1g19450 | LOC_Os01g41810 | Os01g0602200 | CYP72A31 | Detail |
| CX1g006133 | 1:21,248,403-21,248,903 | - | - | - | - | - | - | Detail |
| CX1g005419 | 1:21,260,084-21,262,808 | - | C1H1g22213 | C2H1g05141 | LOC_Os01g41810 | Os01g0602400 | - | Detail |
| CX1g003299 | 1:21,268,974-21,272,158 | - | C1H1g22360 | C2H1g30376 | LOC_Os01g41820 | Os01g0602500 | - | Detail |
| CX1g000347 | 1:21,275,024-21,278,897 | - | C1H1g05853 | C2H1g19557 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| CX1g001572 | 1:21,290,445-21,291,446 | - | C1H1g10576 | C2H1g19557 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| CX1g001367 | 1:21,310,008-21,310,181 | + | - | - | - | Os02g0188201 | - | Detail |
| CX1g005328 | 1:21,325,789-21,330,752 | + | C1H1g05516 | C2H1g15079 | LOC_Os01g41870 | Os01g0602800 | - | Detail |
| CX1g002114 | 1:21,339,491-21,339,670 | + | C1H1g28018 | - | - | - | - | Detail |
| CX1g001319 | 1:21,339,949-21,343,894 | - | C1H1g22010 | C2H1g19193 | LOC_Os01g41880 | Os01g0603000 | - | Detail |
| CX1g003713 | 1:21,354,321-21,354,533 | - | - | - | - | - | - | Detail |
| CX1g000319 | 1:21,363,393-21,364,883 | + | C1H1g14967 | C2H1g00117 | LOC_Os01g41900 | Os01g0603300 | - | Detail |
| CX1g006196 | 1:21,380,905-21,383,823 | + | C1H1g13998 | C2H1g00298 | LOC_Os01g41910 | Os01g0603500 | - | Detail |
| CX1g006848 | 1:21,390,436-21,393,426 | + | C1H1g13998 | C2H1g29899 | LOC_Os01g41930 | Os01g0603800 | - | Detail |
| CX1g006511 | 1:21,402,973-21,405,887 | + | C1H1g13998 | C2H1g00948 | LOC_Os01g41770 | Os01g0604150 | - | Detail |
| CX1g002204 | 1:21,418,177-21,418,929 | - | C1H1g05070 | C2H1g14897 | LOC_Os01g41990 | Os01g0604500 | - | Detail |
| CX1g006048 | 1:21,420,727-21,424,374 | - | C1H1g02821 | C2H1g14362 | LOC_Os01g42010 | Os01g0604700 | - | Detail |
| CX1g006060 | 1:21,435,986-21,437,626 | + | C1H1g28348 | C2H1g02941 | LOC_Os01g42030 | Os01g0605100 | - | Detail |
| CX1g000014 | 1:21,441,170-21,443,438 | + | C1H1g14962 | C2H1g14724 | LOC_Os01g42040 | Os01g0605300 | - | Detail |
| CX1g000292 | 1:21,443,898-21,447,131 | + | C1H1g16958 | C2H1g28671 | LOC_Os01g42060 | Os01g0605400 | OsGEX3 | Detail |