| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g28754 | 1:23,607,123-23,619,376 | - | C2H1g07801 | CX1g006661 | LOC_Os01g46510 | Os01g0653800 | - | Detail |
| C1H1g31351 | 1:23,646,597-23,647,101 | - | - | - | - | - | - | Detail |
| C1H1g31131 | 1:23,669,116-23,676,316 | + | C2H1g26396 | CX1g006750 | LOC_Os01g46570 | Os01g0654100 | - | Detail |
| C1H1g11738 | 1:23,677,773-23,682,848 | - | C2H1g01055 | CX1g002113 | LOC_Os01g46590 | Os01g0654200 | - | Detail |
| C1H1g07135 | 1:23,682,497-23,687,028 | + | C2H1g00478 | CX1g004232 | LOC_Os01g46580 | Os01g0654300 | - | Detail |
| C1H1g04619 | 1:23,687,981-23,692,257 | - | C2H1g09838 | CX1g002075 | LOC_Os01g46610 | Os01g0654500 | - | Detail |
| C1H1g23889 | 1:23,695,972-23,696,916 | - | C2H1g17869 | CX1g005644 | LOC_Os01g46620 | - | - | Detail |
| C1H1g01145 | 1:23,704,815-23,708,740 | + | C2H1g05914 | - | LOC_Os01g46650 | Os01g0654900 | - | Detail |
| C1H1g24345 | 1:23,738,182-23,745,576 | + | C2H1g00999 | CX1g000702 | LOC_Os01g46700 | Os01g0655300 | SDG705, OsSDG705 | Detail |
| C1H1g19947 | 1:23,748,198-23,754,176 | - | C2H1g28065 | CX1g003368 | LOC_Os01g46710 | Os01g0655400 | - | Detail |
| C1H1g28980 | 1:23,758,258-23,763,653 | + | C2H1g30387 | - | LOC_Os01g46720 | Os01g0655500 | - | Detail |
| C1H1g06509 | 1:23,774,585-23,782,512 | + | C2H1g10347 | CX1g005157 | LOC_Os01g46750 | Os01g0655800 | - | Detail |
| C1H1g10344 | 1:23,793,329-23,798,327 | + | C2H1g01219 | CX1g001306 | LOC_Os01g46760 | Os01g0656200 | OsPP2C8 | Detail |
| C1H1g15601 | 1:23,806,716-23,807,930 | - | C2H1g14070 | CX1g006460 | LOC_Os01g46800 | Os01g0656400 | - | Detail |
| C1H1g28624 | 1:23,820,920-23,827,657 | - | C2H1g24475 | CX1g005546 | LOC_Os01g46810 | Os01g0656600 | - | Detail |
| C1H1g31021 | 1:23,835,301-23,839,137 | + | C2H1g08798 | CX1g002002 | LOC_Os01g46840 | Os01g0656900 | - | Detail |
| C1H1g21539 | 1:23,840,054-23,842,127 | + | C2H1g22347 | CX1g004768 | LOC_Os01g46850 | Os01g0657000 | - | Detail |
| C1H1g07661 | 1:23,842,836-23,844,596 | - | C2H1g08096 | CX1g000538 | LOC_Os01g46860 | Os01g0657100 | PT11, OsPT11, PHT1-11, OsPht1;11, ORYsa;PHT1;11 | Detail |
| C1H1g13139 | 1:23,882,417-23,885,239 | - | C2H1g24228 | CX1g006603 | LOC_Os01g46926 | Os01g0658400 | UBC5A, OsUBC5a, OsUBC14, UBC14 | Detail |
| C1H1g10996 | 1:23,886,285-23,889,881 | - | C2H1g04871 | CX1g000846 | LOC_Os01g46932 | Os01g0658500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g005051 | 1:21,213,085-21,218,233 | - | C1H1g30244 | C2H1g19450 | LOC_Os01g41810 | Os01g0602200 | CYP72A31 | Detail |
| CX1g006133 | 1:21,248,403-21,248,903 | - | - | - | - | - | - | Detail |
| CX1g005419 | 1:21,260,084-21,262,808 | - | C1H1g22213 | C2H1g05141 | LOC_Os01g41810 | Os01g0602400 | - | Detail |
| CX1g003299 | 1:21,268,974-21,272,158 | - | C1H1g22360 | C2H1g30376 | LOC_Os01g41820 | Os01g0602500 | - | Detail |
| CX1g000347 | 1:21,275,024-21,278,897 | - | C1H1g05853 | C2H1g19557 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| CX1g001572 | 1:21,290,445-21,291,446 | - | C1H1g10576 | C2H1g19557 | LOC_Os01g41834 | Os01g0602600 | - | Detail |
| CX1g001367 | 1:21,310,008-21,310,181 | + | - | - | - | Os02g0188201 | - | Detail |
| CX1g005328 | 1:21,325,789-21,330,752 | + | C1H1g05516 | C2H1g15079 | LOC_Os01g41870 | Os01g0602800 | - | Detail |
| CX1g002114 | 1:21,339,491-21,339,670 | + | C1H1g28018 | - | - | - | - | Detail |
| CX1g001319 | 1:21,339,949-21,343,894 | - | C1H1g22010 | C2H1g19193 | LOC_Os01g41880 | Os01g0603000 | - | Detail |
| CX1g003713 | 1:21,354,321-21,354,533 | - | - | - | - | - | - | Detail |
| CX1g000319 | 1:21,363,393-21,364,883 | + | C1H1g14967 | C2H1g00117 | LOC_Os01g41900 | Os01g0603300 | - | Detail |
| CX1g006196 | 1:21,380,905-21,383,823 | + | C1H1g13998 | C2H1g00298 | LOC_Os01g41910 | Os01g0603500 | - | Detail |
| CX1g006848 | 1:21,390,436-21,393,426 | + | C1H1g13998 | C2H1g29899 | LOC_Os01g41930 | Os01g0603800 | - | Detail |
| CX1g006511 | 1:21,402,973-21,405,887 | + | C1H1g13998 | C2H1g00948 | LOC_Os01g41770 | Os01g0604150 | - | Detail |
| CX1g002204 | 1:21,418,177-21,418,929 | - | C1H1g05070 | C2H1g14897 | LOC_Os01g41990 | Os01g0604500 | - | Detail |
| CX1g006048 | 1:21,420,727-21,424,374 | - | C1H1g02821 | C2H1g14362 | LOC_Os01g42010 | Os01g0604700 | - | Detail |
| CX1g006060 | 1:21,435,986-21,437,626 | + | C1H1g28348 | C2H1g02941 | LOC_Os01g42030 | Os01g0605100 | - | Detail |
| CX1g000014 | 1:21,441,170-21,443,438 | + | C1H1g14962 | C2H1g14724 | LOC_Os01g42040 | Os01g0605300 | - | Detail |
| CX1g000292 | 1:21,443,898-21,447,131 | + | C1H1g16958 | C2H1g28671 | LOC_Os01g42060 | Os01g0605400 | OsGEX3 | Detail |