| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g04603 | 1:5,989,600-5,994,298 | - | C2H1g00939 | - | - | - | - | Detail |
| C1H1g10595 | 1:6,040,587-6,043,241 | - | C2H1g17446 | CX1g003329 | LOC_Os01g12460 | Os01g0224200 | - | Detail |
| C1H1g28759 | 1:6,043,736-6,045,126 | + | C2H1g06705 | CX1g007058 | LOC_Os01g12464 | Os01g0224300 | - | Detail |
| C1H1g07004 | 1:6,046,920-6,049,789 | + | C2H1g14688 | CX1g001394 | LOC_Os01g12470 | Os01g0224400 | - | Detail |
| C1H1g12177 | 1:6,051,552-6,053,195 | - | C2H1g11914 | CX1g003539 | LOC_Os01g12480 | Os01g0224500 | - | Detail |
| C1H1g07815 | 1:6,068,874-6,071,925 | + | C2H1g03625 | CX1g002397 | LOC_Os01g12490 | Os01g0224700 | YUCCA4, OsYUCCA4, OsYUC4, YUC4 | Detail |
| C1H1g11599 | 1:6,093,803-6,095,860 | - | C2H1g01358 | CX1g005063 | LOC_Os01g12520 | Os01g0225000 | - | Detail |
| C1H1g06137 | 1:6,103,875-6,111,085 | + | C2H1g06869 | CX1g001955 | LOC_Os01g12530 | Os01g0225100 | - | Detail |
| C1H1g01658 | 1:6,112,431-6,119,238 | + | C2H1g08071 | CX1g004081 | LOC_Os01g12540 | Os01g0225200 | - | Detail |
| C1H1g10876 | 1:6,119,514-6,123,943 | + | C2H1g21338 | CX1g000643 | LOC_Os01g12550 | Os01g0225300 | - | Detail |
| C1H1g09440 | 1:6,125,263-6,127,401 | - | C2H1g20462 | CX1g000722 | LOC_Os01g12560 | Os01g0225400 | - | Detail |
| C1H1g18546 | 1:6,128,365-6,130,365 | - | C2H1g08221 | CX1g001058 | LOC_Os01g12570 | Os01g0225500 | - | Detail |
| C1H1g06023 | 1:6,184,979-6,187,554 | + | C2H1g26314 | CX1g004850 | LOC_Os01g12650 | Os01g0226300 | - | Detail |
| C1H1g23194 | 1:6,188,433-6,193,837 | - | C2H1g13868 | CX1g002355 | LOC_Os01g12660 | Os01g0226400 | - | Detail |
| C1H1g24866 | 1:6,196,677-6,202,642 | + | C2H1g02547 | CX1g000068 | LOC_Os01g12670 | Os01g0226500 | - | Detail |
| C1H1g15047 | 1:6,208,060-6,210,523 | + | C2H1g29977 | CX1g004471 | LOC_Os01g12680 | Os01g0226600 | - | Detail |
| C1H1g31834 | 1:6,225,761-6,226,951 | + | C2H1g09030 | CX1g004458 | LOC_Os01g12690 | Os01g0226700 | - | Detail |
| C1H1g16770 | 1:6,242,041-6,248,766 | + | C2H1g01170 | CX1g003495 | LOC_Os01g12710 | Os01g0227100 | - | Detail |
| C1H1g09261 | 1:6,249,653-6,250,603 | + | C2H1g01170 | CX1g003495 | LOC_Os01g15700 | Os01g0527900 | - | Detail |
| C1H1g17285 | 1:6,261,105-6,265,913 | + | C2H1g13949 | CX1g000717 | LOC_Os01g12720 | Os01g0227200 | OsPERK1 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX4g034131 | 4:27,961,342-27,964,470 | + | C1H4g07866 | C2H4g15249 | LOC_Os04g54474 | Os04g0637000 | - | Detail |
| CX4g036167 | 4:27,967,829-27,968,056 | + | C1H4g24297 | C2H4g00672 | LOC_Os04g54490 | Os04g0637300 | OsEFP1 | Detail |
| CX4g032005 | 4:27,969,168-27,976,061 | + | C1H4g14745 | C2H4g25987 | LOC_Os04g54500 | Os04g0637400 | - | Detail |
| CX4g033635 | 4:27,977,336-27,978,517 | - | - | C2H4g06557 | LOC_Os04g54510 | Os04g0637500 | - | Detail |
| CX4g033634 | 4:27,980,692-27,982,126 | - | C1H4g12494 | C2H4g09556 | LOC_Os04g54560 | Os04g0638100 | - | Detail |
| CX4g031664 | 4:27,987,379-27,988,092 | - | C1H4g12494 | C2H4g09556 | LOC_Os04g54570 | Os04g0638100 | - | Detail |
| CX4g031761 | 4:27,991,810-27,992,519 | - | C1H4g04104 | C2H4g03681 | LOC_Os04g54590 | Os04g0638700 | - | Detail |
| CX4g033870 | 4:27,997,686-27,998,216 | + | - | C2H4g26056 | LOC_Os04g54600 | Os04g0638800 | - | Detail |
| CX4g032536 | 4:28,001,979-28,002,185 | + | - | - | - | - | - | Detail |
| CX4g035252 | 4:28,004,594-28,004,888 | + | C1H4g09803 | C2H4g04397 | LOC_Os04g54610 | Os04g0639000 | - | Detail |
| CX4g036497 | 4:28,007,315-28,007,778 | + | C1H4g30992 | C2H4g07968 | LOC_Os04g54620 | Os04g0639100 | - | Detail |
| CX4g033211 | 4:28,009,306-28,010,012 | + | C1H4g10736 | C2H4g28500 | LOC_Os04g54630 | Os04g0639200 | - | Detail |
| CX4g034099 | 4:28,011,503-28,013,843 | - | C1H4g01091 | C2H4g06202 | LOC_Os04g54640 | Os04g0639300 | - | Detail |
| CX4g031964 | 4:28,014,829-28,016,909 | - | C1H4g07903 | C2H4g15533 | LOC_Os04g54759 | Os04g0640300 | - | Detail |
| CX4g033460 | 4:28,018,017-28,018,175 | - | - | - | - | - | - | Detail |
| CX4g036105 | 4:28,025,888-28,033,674 | + | C1H4g22371 | C2H4g02260 | LOC_Os04g54790 | Os04g0640500 | - | Detail |
| CX4g035804 | 4:28,034,684-28,037,764 | - | C1H4g26128 | C2H4g05866 | LOC_Os04g54800 | Os04g0640600 | OsSK3 | Detail |
| CX4g034954 | 4:28,039,152-28,039,364 | - | - | - | - | - | - | Detail |
| CX4g034360 | 4:28,042,039-28,049,812 | - | C1H4g06695 | C2H4g10958 | LOC_Os04g54810 | Os04g0640700 | - | Detail |
| CX4g032330 | 4:28,056,537-28,058,894 | + | C1H4g02933 | C2H4g21502 | LOC_Os04g54820 | Os04g0640800 | - | Detail |